Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00399 ATGATGGATGAACAGAATGAATTCAAACAAGATTTCGGAGATGAATGTACTAAGGGAGCGTATTTTTCTGAATTTGATCTGTCAGAAGATACCCTTAAAGCTGCTTATACGGTTGACTCCGTGCAAGACATTATAATTTTGAATTTCAGTAAAAATTATGCAGAGAAAATTGGTAAATATCACTTTTTTACTTTGCAGCTTGCAATTGATTTTTATCTGAAGTACTCAAAGTCAAAGGAATTTAGTGCAAGGAAGAGTAAGACTTTCAAGAATAGTATTGGTGAGGTTTACAAACAAAAGTTTGTATGCCATAGGCAAGAATTCAGGGAGGAGAAGTATTACACGATAGAAAAAAGGAAGAAGGAGCCTATATTGAAACAAGAACTGGGTGTGAAGCTCGAATGGATGTTAAATTTTGCTATGTTGCCTGCCCATAGAAAAATGTCAGAGACAGATATTATGCAAATGATGAACATGCTAAAGTCCGGGATTAGAATTTCACAGATATTGGGTCTTCTAGTTAGTCAAGCAGGCGGGTATAAATTTGTTGGCTATGGTCCCAGAGATATGTATGATGAGATTGCTCGGCAAAGGCGTCAAGTTCCTGGTGATACAGGTAAGACCCCAACCTCAATAATAAGTGATGGAGACATGGCGATTAGGAATGTAGTAAGAGATGTATTTTCCAAAGTCAGGTATAGCAATGTTGAAAATCCATCGCTTACATCTAAATTCAGGAAAATCATGTTGGGAGACTATGAGATTCCCGTGTTTAAGCGTAAGTGGATTCAGCTTGTTGAAGAATTTGGCCTTGAAGATAAGCCGTGGGTGAACAACATGTATGAAGAGAAGCATATGTGGGCTACTGCATATATAATAAGTAAGTTTTTTGCTGGTTTTAAAACTACCTCAAGATATGAAGGTTTACACTCAGTTGTGGCAAGGTATGTGGGGTCCCGATATAATTTGACAAATTTTGTAGAGCATTTTCAAAGGTGTGTTGCACACTTGCGCTCTAAAGAATTTAATGCTGATTATGAATCTACACGTGGGGTACCCGTCATGCAGACTTGTATAGAGCTGCTAGAGAGATTTGCTGCTGAGGTATACACTCATGAAATATTTCTATTATTTCGGCCATTTCTTTCTAGAGCTGGATCAATGCGGGTGTTAAATATAGAGAATAACGATGATTGCTCAAAGTACATTGTGTGTAAGCATGGGAGGTCCGATTTTCTGTGGACCGTTGAATTTCGTCAAGAAGAAATGATCTTCATGTGTTCTTGTTTAAGAATGGAGTTATTTGAAATTCCTTGCAAACATATTGTTAAAGTTCTGGTTGACAAAGATAATTGTGAGATTCTCCAGTCATTAGTGTTGGATAGATGGACAAAAAAGGTGAAATCATTACTCAATGATGCAAGTGGGTTCACCAGGAATGTTGTTGTTATTAATCGTCAAAGTGCCTTGATAGAATTTTTTAAACAATTGACTGTTGTTGCTACTAAAGTCCCAGAGAGATTTGAAGAGACACGAGACATTATTATGGGGTTGTACTCATCTTACATGGCTGCAGATGAAGGCACTAAGCAACCTCAGTCATGTGTAGCTAAAAGTAGCAATCCGTATGTGCATCAAACTAATATAGGCTCAGGACATCCATCTAAGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAAAAGACAATATGTCCTTGGCAAAAGGACATTGACAACAACGTCATGGGAGATGAACCTAATGGTTCAGATGATGGTGAAAGACCTCTTATCCAACTCAATAAGATCATCTTCATCATCCGATATAGCACTATGAATATCAATATCCAAACTCTTAGCCTTCAATCTATTTAG 1884 0.3753 MMDEQNEFKQDFGDECTKGAYFSEFDLSEDTLKAAYTVDSVQDIIILNFSKNYAEKIGKYHFFTLQLAIDFYLKYSKSKEFSARKSKTFKNSIGEVYKQKFVCHRQEFREEKYYTIEKRKKEPILKQELGVKLEWMLNFAMLPAHRKMSETDIMQMMNMLKSGIRISQILGLLVSQAGGYKFVGYGPRDMYDEIARQRRQVPGDTGKTPTSIISDGDMAIRNVVRDVFSKVRYSNVENPSLTSKFRKIMLGDYEIPVFKRKWIQLVEEFGLEDKPWVNNMYEEKHMWATAYIISKFFAGFKTTSRYEGLHSVVARYVGSRYNLTNFVEHFQRCVAHLRSKEFNADYESTRGVPVMQTCIELLERFAAEVYTHEIFLLFRPFLSRAGSMRVLNIENNDDCSKYIVCKHGRSDFLWTVEFRQEEMIFMCSCLRMELFEIPCKHIVKVLVDKDNCEILQSLVLDRWTKKVKSLLNDASGFTRNVVVINRQSALIEFFKQLTVVATKVPERFEETRDIIMGLYSSYMAADEGTKQPQSCVAKSSNPYVHQTNIGSGHPSKKKRQRCSVCQMEGHKKTICPWQKDIDNNVMGDEPNGSDDGERPLIQLNKIIFIIRYSTMNINIQTLSLQSI 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00399 627 Pfam SWIM zinc finger 427 446 IPR007527 GO:0008270
Adu08g00399 627 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 206 508 IPR031052 GO:0006355
Adu08g00399 627 ProSiteProfiles Zinc finger SWIM-type profile. 412 450 IPR007527 GO:0008270
Adu08g00399 627 PANTHER OS01G0607050 PROTEIN 206 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00399 Adu-Chr8 7198488 7200763 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu08g00399 SWIM 0.00045 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00399 - - aip:107620889 654.825