Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00370 ATGATTTTTTGGAGAACAATTCTCAGGTATCCTGTGTTGATTTCATGCAGCTTCGACCGGTTTCCACTGGGTTGGGTTTGTCACTCGACAATACCCGTTTTCCTTCCACCGGAGATTCTGCTTTGTCTTCGCTCGTTGTTGACGATATTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGATTTATCCGAGTGCAGGGTGAACAAATGCGGCAATCCATTCTACGGAAAGTTCAGGAAACGCAACTTCAGAGTCTATCTATCATTGAAAACGAAGTCCTTCGTAAACTCCATGAGAAAGAATCTGAGGTAGAAACCATCAATAAGAAGAACGTAGAACTTGAAGAGAGAATGGAGCAGTTAAGTGCTGAAGCCGATGTCTGGCAACAACGAGCCAGATATAATGAGAATATGATTTCTGCTTTGAAACTTAAGCTTCAGCAAGTTTATGTCCATAGCAGAGACAGTAAGGAAGGATGTGGTGACAGTGAGGTAGATGATACAGCTTCATGCTTCAACGGCCATTCCATTGATTTTCAACTTCTCTCACAAGAGAAGAACAATATGAAAGAAATGATGACTTGCAGGGCTTGCAGAGTCAATGAAGTCACCATGCTTTTATTACCTTGTAGGCATCTCTGCCTCTGTAAAAATTGCGAGAGTAAGCTCAGTTTTTGTCCTGTGTGTCAATCCTCTAAATTCATTGGCATGGAGGTGTTTATGTAA 750 0.3867 MIFWRTILRYPVLISCSFDRFPLGWVCHSTIPVFLPPEILLCLRSLLTILXXXXXXXXXXXXXXXXXXRFIRVQGEQMRQSILRKVQETQLQSLSIIENEVLRKLHEKESEVETINKKNVELEERMEQLSAEADVWQQRARYNENMISALKLKLQQVYVHSRDSKEGCGDSEVDDTASCFNGHSIDFQLLSQEKNNMKEMMTCRACRVNEVTMLLLPCRHLCLCKNCESKLSFCPVCQSSKFIGMEVFM 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00370 249 Coils Coil 105 139 - -
Adu08g00370 249 Pfam Zinc finger, C3HC4 type (RING finger) 201 239 - -
Adu08g00370 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 247 IPR013083 -
Adu08g00370 249 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 68 249 IPR017066 -
Adu08g00370 249 PANTHER F2G19.2 68 249 - -
Adu08g00370 249 ProSiteProfiles Zinc finger RING-type profile. 203 238 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00370 Adu-Chr8 6499634 6501916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00370 198 238 C3H Transcription Factor Family AT1G73950 46.341 1.86e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00370 K19042 - gmx:100783373 299.671