Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00368 ATGGACAACACCATTGACCAGTTGAAATCATCTTCCTCTTCGGAAGAGGATCAGATGGACTTGATGAACATGATGATGATGCAACTTCCTAACGAATTCTCTTCACCTAATTACGCTGATGAGACCAGCGTCCAAGGATTCCACCCATCACCACAGCTTCTTGGTGCACGCAGTAGCAGTACTATGCAACTATCAGATTCAATTGATAACAGAAATTCTATCATGCCCTGGTCTTCACCATCCACCACAATCTCTTTCTCTAACAACAACACTACCTCAATGCTTCAAACAGAATTGCCATCTTTGTTGGGAAATTCAGGTGCAACGGAGAATAAGCGGAACTCGATGGCGGCGATGAGGGAGATGATATTCAGAATAGCGGCCATGCAGCCAATACACATAGACCCTGAGTCAGTAAAGCCACCAAAGCGGAGGAACGTGAAGATCTCGAAGGATCCACAGAGTGTGGCGGCGCGGCACAGGAGAGAAAGGATAAGTGAGAGAATAAGGATACTGCAGAGACTGGTCCCCGGAGGAACCAAGATGGACACTGCTTCAATGCTTGATGAGGCCATTCACTACGTCAAATTTCTCAAGGCTCAGATTCACTCATTGGAACGTGCTTCTTCTTCTGCAAGCAATAATAATAATAATAATGCAACTGCATCAGGTGCAGGTGCAGCTACTGCCACTGCCAATGCCCCTGGCGCCTCTTATCTTTCTCTACCTAAACCTTATCAAGGTCGAAATGCTCACCATTATGGAGATGCATGA 774 0.4612 MDNTIDQLKSSSSSEEDQMDLMNMMMMQLPNEFSSPNYADETSVQGFHPSPQLLGARSSSTMQLSDSIDNRNSIMPWSSPSTTISFSNNNTTSMLQTELPSLLGNSGATENKRNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKAQIHSLERASSSASNNNNNNATASGAGAATATANAPGASYLSLPKPYQGRNAHHYGDA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00368 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 208 IPR036638 GO:0046983
Adu08g00368 257 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 5 248 IPR045843 GO:0003700|GO:0006355
Adu08g00368 257 SMART finulus 155 204 IPR011598 GO:0046983
Adu08g00368 257 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 5 248 - -
Adu08g00368 257 Gene3D - 148 222 IPR036638 GO:0046983
Adu08g00368 257 Coils Coil 195 215 - -
Adu08g00368 257 Pfam Helix-loop-helix DNA-binding domain 158 198 IPR011598 GO:0046983
Adu08g00368 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00368 Adu-Chr8 6461439 6462472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00368 75 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 65.359 2.12e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu08g00368 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00368 - - aip:107607656 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00368 08 6461439 6462472 Adu08g00368 08 6461439 6462472 ECH