Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00332 ATGGAAGCATTGAATAATAGAAGCTCATCGTGCACGGCGTCTTCTTCGGACTCTTCGTCTTCGGAGTCAACGCAAAGGAATCCCAACAGGCCCGAGAGGATCAAAGGTCCATGGAGCGCAGAAGAAGACCGGATCCTGACCCGCTTGGTGGAGAGATACGGGGCACGAAACTGGTCTCTCATTAGTCGCTACATAAAGGGGAGGTCGGGCAAGTCCTGCAGACTAAGGTGGTGCAACCAGCTAAGCCCAACGGTGGAGCACCGTCCCTTCTCCTCCCACGAGGACGACACCATCATCGCCGCCCATGCCCAGTACGGTAACAGATGGGCCACCATTGCCAGGTTATTGCCGGGCCGAACCGATAACGCCGTAAAGAACCACTGGAACTCCACTCTCAAGCGGAGGGCCAGAGACCAACGTCGCGGTGGTAGTGCTACCGGAGTTCACGCTACTTGCGCTTCTCTTGCTGCGGCGCCAACAAACGAGAGAGCCTCGTGTTCTTCAGGGGCCCTGCCACCTTGCACGTTGCCCTTGGAGGATGACCCGTTGACTGCGTTGACTCTTGCCCCGCCTGGGATTGATCGTGGTAGCGGTGCGATGGAGGCGGAGCAACAGCGAGCCTCGCCGGAGACTAGTGTGGGTTCAGGGTTTTGGGATGTGATGAGGGATGTGATTGCCAGGGAAGACTTGCTAAGACGGGCTTGTCGTTCTTCATCTCTCTCTCTCTCTCTGTTGGGGGTTCGTCGTGCCGCCGTCGCTGGGTTCAGCCGTTCCGTCGCTGTTAGACCAATCCTCTACTGCTCCCCTCATCTTCTCTATGCATCTGCGGACTTTCTCTTCGCCGTCGCGGGGCCTGGGCTCCGGTTCCTCTCCTGTCACACTATGTTTTGCTGCGCCGCCATCGCTAGAGTTTCAACCATTCTGTCGTTGTTGGTTGTCATCGAACGCTTCTCCTCCGGTAGAAGGTGCTGTCGCCGCGCCGGGGACAGACCGTGGGTGCCTTTGTCATCTGGGGAAGCTCTACTCGACCCTCTTCGCATTGTTTCTCCTCTCCTCGCCGTCGCACCAAGTTTTGAGTTGAGCTCGTGGCGTCACCGTCACGAAGGGTTCCTCCCCTCCTCGCCCTTTAGGTATCATAGAAGCTGTAGCTGTGACGTCATTGAACAAAAATCTGGACGAGGATACTCTAATGGTATTGTCTCTGTTAAGATTGGATTAAAGCAGGGCCTGGAGATGCTGAATATCTTCAAAAACTATTCTGTCAAGACATCTCTACTAAATGATTTTGACTTCTATGAGAACCGAGAGAAATTACTTTGTTCAGATAAAAGATCCAAGGGGGAGTTTGATGCTATTGGAGGATCAGAACAATATCGAAGCAAGCCTAAGCGTACAATTCGAAGACCGGAAGGATATGGGTATGACAGTTACCAAGTAAGTTTCATTTTTGTTGAATGGAATGATTCTCATTCACCTTTGCAATTGAAGCATTAG 1494 0.5308 MEALNNRSSSCTASSSDSSSSESTQRNPNRPERIKGPWSAEEDRILTRLVERYGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSSHEDDTIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRARDQRRGGSATGVHATCASLAAAPTNERASCSSGALPPCTLPLEDDPLTALTLAPPGIDRGSGAMEAEQQRASPETSVGSGFWDVMRDVIAREDLLRRACRSSSLSLSLLGVRRAAVAGFSRSVAVRPILYCSPHLLYASADFLFAVAGPGLRFLSCHTMFCCAAIARVSTILSLLVVIERFSSGRRCCRRAGDRPWVPLSSGEALLDPLRIVSPLLAVAPSFELSSWRHRHEGFLPSSPFRYHRSCSCDVIEQKSGRGYSNGIVSVKIGLKQGLEMLNIFKNYSVKTSLLNDFDFYENREKLLCSDKRSKGEFDAIGGSEQYRSKPKRTIRRPEGYGYDSYQVSFIFVEWNDSHSPLQLKH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00332 497 CDD SANT 89 132 IPR001005 -
Adu08g00332 497 MobiDBLite consensus disorder prediction 194 213 - -
Adu08g00332 497 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 136 IPR017930 -
Adu08g00332 497 MobiDBLite consensus disorder prediction 1 38 - -
Adu08g00332 497 Pfam Myb-like DNA-binding domain 38 95 - -
Adu08g00332 497 SMART sant 34 83 IPR001005 -
Adu08g00332 497 SMART sant 86 134 IPR001005 -
Adu08g00332 497 CDD SANT 37 79 IPR001005 -
Adu08g00332 497 Gene3D - 34 86 - -
Adu08g00332 497 ProSiteProfiles Myb-like domain profile. 30 81 IPR001005 -
Adu08g00332 497 MobiDBLite consensus disorder prediction 1 27 - -
Adu08g00332 497 Gene3D - 88 147 - -
Adu08g00332 497 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Adu08g00332 497 SUPERFAMILY Homeodomain-like 32 128 IPR009057 -
Adu08g00332 497 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 85 IPR017930 -
Adu08g00332 497 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 1 229 - -
Adu08g00332 497 PANTHER MYB PROTEIN-RELATED 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00332 Adu-Chr8 5851102 5861197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00332 32 194 MYB Transcription Factor Family AT3G50060 57.055 2.63e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu08g00332 Myb_DNA-bind_6 3.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00332 - - zju:107420865 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00332 08 5851102 5861197 Adu08g00332 08 5851102 5861197 ECH