Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00316 ATGAGTGTTTCTTTGACTATGATGACCTTCAAACTGCATGATGATCAAGCAGAAGATAGTCCCAATTCATGGGAGAAGAGGAGGGACTTATTCACGGAGAATGATGGCAAAGAGTCGTATAAAGATGGTGATCAATCTGAGGATTTAAGTGTTGAGTATGAGTGCAGTTTGGATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGCAGAGGCAGATATAATTAATGTTGATGGTTTTGAAAAGTTGATAACTGATTTGACCATCAAAGACATATGGGGACTGGTGTTTGATACAGAATCTCAAGTTTGTGAATTTTATGCCAAATATACCAAGTGCTATGGATTTGTGTCCCGAAAAGACTTAAAGACGGTGGATGCTAATGGCAACATTAATACAAGACAATTGGGCGAGGATTCGTTTCATTCGTCACTATATAGAACAGGTAAGTGGAAAGTCAGTGTCTTTGAGAGTGAACACAATCATCAACTGTGTCCACCTAAGTGCATACATCTTATTGCCGCAAATCGTGGGCTTAATGAGGCCGATAAAACACAAGCAGACAACTTGCGAGCATGTGGTGTTAAAACTTGCCATAGTGGGATGCTCATATTTCTGCTAATAAGAATGTGCTTATGGCTGTTAATTTGGACTCCCATAGATGGTGAATTTGATGACTACAACATTAATCCAAAACCTAGTGGCTATCAGTCCTTGCACACTGCAGTACAAGGTCCTGATAACTCAGTCTTTGAAGTCATTGAAGCCTGGACATCCAGTCCTCAGGGTAGAAGGAAGTTACTTACTTGCTGCTGTAATCATGAGATTAAGCGATGGAAAGCTTATGCACAACAAATTGAAGAGAAAGAGGAGGCCCGTGATGAAGATGATGATGGTGATGATGATGTTCAGTGGCAAACGGATACATCTATTGATGCTGCTCGTCAACGCATGCTCTCGACAAATGAACCAGAAAAGAAGAAGAAGAAAACAGAAAGCAAGGATTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGTCAAGGAAGTGAAAGCATATTTGAAGAAAGGATTATTTAATGGCGTCGAAAAAGGGTTTGGAAAAGAAGCTACCAAGACAAAGAATCACCTTGCTGCTGTAGTTGCTGGAGATGACAAGGGATCACAGATATTATTGCTCAATGCTGTTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGCGTTGAAGGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAAAAAGAGCACGTCGTGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAAATATGGAAGAATTCTCAACCATTCATTGATTGGCCTCAGAATGCTGAATCAGAATCGGAGGAAGAATGA 1410 0.4064 MSVSLTMMTFKLHDDQAEDSPNSWEKRRDLFTENDGKESYKDGDQSEDLSVEYECSLDESDDMVDVTVDEAEADIINVDGFEKLITDLTIKDIWGLVFDTESQVCEFYAKYTKCYGFVSRKDLKTVDANGNINTRQLGEDSFHSSLYRTGKWKVSVFESEHNHQLCPPKCIHLIAANRGLNEADKTQADNLRACGVKTCHSGMLIFLLIRMCLWLLIWTPIDGEFDDYNINPKPSGYQSLHTAVQGPDNSVFEVIEAWTSSPQGRRKLLTCCCNHEIKRWKAYAQQIEEKEEARDEDDDGDDDVQWQTDTSIDAARQRMLSTNEPEKKKKKTESKDSENGDTVNYATVVKEVKAYLKKGLFNGVEKGFGKEATKTKNHLAAVVAGDDKGSQILLLNAVEEFCYKKGSNALKEVALILKALYDVDLVEKEHVVHWYSKGLKGDKKDSQIWKNSQPFIDWPQNAESESEEE 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00316 469 SUPERFAMILY ARM repeat 346 463 IPR016024 -
Adu08g00316 469 SMART 542_3 377 465 IPR003307 GO:0005515
Adu08g00316 469 MobiDBLite consensus disorder prediction 320 338 - -
Adu08g00316 469 Gene3D Beta Polymerase, domain 2 208 255 IPR043519 -
Adu08g00316 469 Gene3D - 313 469 - -
Adu08g00316 469 ProSiteProfiles W2 domain profile. 295 469 IPR003307 GO:0005515
Adu08g00316 469 MobiDBLite consensus disorder prediction 450 469 - -
Adu08g00316 469 SUPERFAMILY Nucleotidyltransferase 217 254 IPR043519 -
Adu08g00316 469 CDD W2_eIF5 346 467 - -
Adu08g00316 469 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 358 469 IPR045196 GO:0003743|GO:0006413
Adu08g00316 469 MobiDBLite consensus disorder prediction 316 340 - -
Adu08g00316 469 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 358 469 - -
Adu08g00316 469 Pfam eIF4-gamma/eIF5/eIF2-epsilon 391 469 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00316 Adu-Chr8 5625566 5631449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00316 306 462 Eukaryotic Initiation Factors Gene Family AT1G77840 41.951 1.88e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00316 K03262 - aip:110269479 283.878