Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00302 ATGATCATCATCAGAAAGCACACAATTTTGATCCTTCTAGTGTTATGCTTTCTCTTCCTCTCTCTAAGCACAGCACAAGTGAACTACCGAACGTGCAACCAAACATGCGGTTCATCCAAACCTTACCCTTACCCTTTCGGATTCTCCTCCGACTGCGGAATCCGCCTCAATTGTACCACCGACGGCGGAATCTTGATCGGTAAATTCCCAGTCCAAGAAGTAACAACGGACAGCATAATCGTCGGCATCAAAGCACAGTGCAATCGCCCATTTTATACATTCCACGAACTCTTCAGCCACAAGTACGCTCCCACATCGGGGAACGTGATCTTCGTGCAGAACTGCTCCAAAACGGCGTCGTCTTGCACCGTTCCGGAGGCTATGGTGCGGGAATACTTTGACTACTCTGAGGATTGCAGAGAGGGAAGTAGCTTGAGCTGCTACTTCGAAAACAACAGCACCAACAAGTTCTTGAATAAGAGCATCTTGGATGGGTACGGCTGTGGCAACTTTATGTCTTCCATCTGTTCGGAAAATTTGAGGAACAATTCCGGTGCTACGGTGTCGTTGGAGGTAGCCACAATTCAGCTTGGTTGGTGGCTTCAGGGAGCTTGCCAGTGTTCTAGTGATGCTAATTGTACCGAAATTGAGTCCCCCGTTGATCGGAAACCCGGCTTTCGGTGTACCTGCAAGGAAGGCTTTGTCGGCGATGGCTTTCTTGCCGGAACAGGCTGTACGAGAATCAGAGCATGCAACGCAGCCAAGTACATGTCTGGCAGATGTGGAGGAACAGCGAGATTTGTCATCTTGATTGCAGGATTTGCTGTAGGAATTTCAGTGATGATAAGTGCGGTTTCAGTATTTTGTTGTTTGTTTAAAAGGCGCAGCAAATTGAGAGTCACAAAGAGCACAAAAAGGCGGTTCACGGAAGCAACCGTCAACTACAGCGTCCCTATCTATCCCTACAAAGACATAGAGAGAGCCACCAACAGTTTCTCTGAGAAACAACGCCTGGGAACCGGTGCATACGGTACAGTTTACGCGGGAAAACTTCACAACAATGATGAATTGGTTGCCATCAAGAGAATAAAACAGAGGGACGCCAACGACAGCATCGAGCAAGTAATGAACGAGATCAAGCTCCTCTCTTCAGTCAGCCACACTAACTTAGTGCGATTGTTGGGTTGCTGCATAGAACACGGAGAACAGATCCTCGTCTATGAGTTCATGCCGAACGGAACATTGAGTCAGCATCTTCAAAAAGAACGAGGAGACGGTCTTTCATGGCCGATTCGATTAAGAATTGCCACCGAAACAGCACAAGCCATTGCACATCTTCACTCTGCCATGAATCCCCCAATCTACCATAGAGATATCAAATCCAGCAACATACTCTTGGATTCCAATTTCGGTTCAAAGGTAGCTGATTTCGGTCTCTCTAGACTTGGAATGACTGAAATATCCCACATTTCAACGGCGCCACAGGGGACCCCTGGCTATGTTGATCCGCAGTACCATCAAGACTTTCATCTTTCTGACAAGAGTGATGTTTACAGCTTCGGCGTTGTTCTTGTTGAGATCATAACTGGACTCAAGGTGGTTGACTTTACCCGCCCTCATAATGAAGTGAACCTGGCCTCCCTTGCAACTGATAGGATCGGGAACGGGCTCTTGGACGAGATCATAGACCCCTTTCTTGTGCCTCAAGCAAGAAGTGATCCTTGGACACTTTCCTCAATACACAAGGTTGCTGAGTTGGCATTTAGATGCCTTGCGTTCCATAGAGATATGAGGCCTTCAATGACAGAAGTGGCAAGCGAGTTAGAACAACTCACTCTTACTACGTGGCCTAGTTTTGGTGACAATCATAATTGTGTAGCTTCTACAGAGTTATCCTCTTCTTCTTCCTCCTCCTCCTCTTCTAATGAGAGTGAGAAACCACTTAGCAGTAGAACCAAGGTCGGGCTATTAACTGGGCCCAAGTTAAGGTCGTTGTTGGATAGGACCAAAAGTAGCTCACCGGTTTCGGTGCAAGATAGAGAAGTATGGTTGAGTGAACAAAGCTCTCCCTCGTCAAATAGTTTCCCTAGCAAGTCATTTGATTGA 2106 0.4701 MIIIRKHTILILLVLCFLFLSLSTAQVNYRTCNQTCGSSKPYPYPFGFSSDCGIRLNCTTDGGILIGKFPVQEVTTDSIIVGIKAQCNRPFYTFHELFSHKYAPTSGNVIFVQNCSKTASSCTVPEAMVREYFDYSEDCREGSSLSCYFENNSTNKFLNKSILDGYGCGNFMSSICSENLRNNSGATVSLEVATIQLGWWLQGACQCSSDANCTEIESPVDRKPGFRCTCKEGFVGDGFLAGTGCTRIRACNAAKYMSGRCGGTARFVILIAGFAVGISVMISAVSVFCCLFKRRSKLRVTKSTKRRFTEATVNYSVPIYPYKDIERATNSFSEKQRLGTGAYGTVYAGKLHNNDELVAIKRIKQRDANDSIEQVMNEIKLLSSVSHTNLVRLLGCCIEHGEQILVYEFMPNGTLSQHLQKERGDGLSWPIRLRIATETAQAIAHLHSAMNPPIYHRDIKSSNILLDSNFGSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFTRPHNEVNLASLATDRIGNGLLDEIIDPFLVPQARSDPWTLSSIHKVAELAFRCLAFHRDMRPSMTEVASELEQLTLTTWPSFGDNHNCVASTELSSSSSSSSSSNESEKPLSSRTKVGLLTGPKLRSLLDRTKSSSPVSVQDREVWLSEQSSPSSNSFPSKSFD 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00302 701 Gene3D Laminin 205 241 - -
Adu08g00302 701 Gene3D Phosphorylase Kinase; domain 1 293 409 - -
Adu08g00302 701 SMART serkin_6 332 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00302 701 Gene3D Transferase(Phosphotransferase) domain 1 410 620 - -
Adu08g00302 701 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 645 IPR045274 GO:0007166
Adu08g00302 701 Pfam Protein kinase domain 332 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00302 701 SUPERFAMILY Protein kinase-like (PK-like) 308 609 IPR011009 -
Adu08g00302 701 ProSiteProfiles Protein kinase domain profile. 332 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00302 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Adu08g00302 701 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
Adu08g00302 701 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 24 645 - -
Adu08g00302 701 CDD STKc_IRAK 338 611 - -
Adu08g00302 701 MobiDBLite consensus disorder prediction 665 701 - -
Adu08g00302 701 MobiDBLite consensus disorder prediction 630 701 - -
Adu08g00302 701 MobiDBLite consensus disorder prediction 630 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00302 Adu-Chr8 5342282 5353418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00302 1 695 Receptor kinase-like Gene Family AT2G23450 49.860 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Adu08g00302 Pkinase 3.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00302 - - gmx:100777480 936.406