Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00290 ATGACAAGCCCAACTGTATCGAAGAATCGCAACGGCCTTCGTTCCATGTTACAAGTGAATTTGCAGCAGGCATATCATCATGACATGATGAAAAATAGTAATGATGAATCCTCTAACAGTAACAGCAGTCCCTACTACAAAGGCCTCACCGATCAATCCCTTGCCATCTTTGCACCCTCATCTCCACCTCATCATCATCATGATCATGCTACCATTCCTTGCTACCCTGTTACTCCTCTTCCTCTCCCCAGCCTTCATCCTCACCTTTCATCATCCGGATCTGGGGCGCAGGGGCAAAGTCCGTACTACAAGGGTCTTACCGATTATTCCCTTGTTATTGGTTCTTGGAGCAGCCACAATCCTACTTCCACCAATCCATCATACCACCCTCAGTCTAGCCCTTACTACAGGGGCCTCACGGATTTCTCCCTTGTCCTTCACGATCATCCTCAGGAGACAGAGATTGATCCCAATGATGGTGAGGTTGAGGGCGACTTAGTACTGATCCAAGAAGATCATAAGACAGTATTAACAGAAGAGGTTAATGCCAAAGGGGTTCTATTAGTGGAGATGGAGGTTATTGATGCCACCCATGAAGAAGAGGAGCCATTGAGGGAGAGAGTGACAGTAACACCGGATGATGATGATTTACAAGACACAAGGACGAAGGAGGATATTTATCATCATCATCAGGAAATAACATCACTACAAGAGGACCCAAATGCATACCAATATGAATGGGCAACCAAACACCAGCCCCAAACCTTGGAAGAATTCATCTGCAACTCTGATAAAGCACTCCAACTCCAAGCATTAGTAAGAGAGGGTTGTGGCTGTAATCATTTTATATTTGAGGGACCCCCCAACGTAGGAAAGAGATCCATGATCCGGGCTATGCTTCGCGAGCTATTCGGCCCTCAGAGACTGCAGGTAATGAATTTCCCTATCGGAAAATGCTATTCGTTGaaaaatGGAGAAATGGTTGACAAGCTGCAAGTGCAGATAAAAAAATCACTGCATCATGTGGAGATCAATGTCTCAGAGACAAAGGGGTACGAAAAACACGTAATTGCGGATTTATTCAACGGAACATATGCCAAGACGATAAATAACTCCCTGCCTTGTAGCCCAGATAACTGCCAAGCAATCGTATTGTATGAGACGGAGAAGCTATCAATAGAATCGTTGTTGTATATTAAGTGGCAACTAGAAAAGTATAAAGGATGTAATAAGGTGTTCTTTTGTTGTTCCGACGAATCTAAGCTCCACCCTATCAAACCACTTTGCACCACTCTCCGCCTTTCACCACCTTCATCCCAAGAG 1323 0.4467 MTSPTVSKNRNGLRSMLQVNLQQAYHHDMMKNSNDESSNSNSSPYYKGLTDQSLAIFAPSSPPHHHHDHATIPCYPVTPLPLPSLHPHLSSSGSGAQGQSPYYKGLTDYSLVIGSWSSHNPTSTNPSYHPQSSPYYRGLTDFSLVLHDHPQETEIDPNDGEVEGDLVLIQEDHKTVLTEEVNAKGVLLVEMEVIDATHEEEEPLRERVTVTPDDDDLQDTRTKEDIYHHHQEITSLQEDPNAYQYEWATKHQPQTLEEFICNSDKALQLQALVREGCGCNHFIFEGPPNVGKRSMIRAMLRELFGPQRLQVMNFPIGKCYSLKNGEMVDKLQVQIKKSLHHVEINVSETKGYEKHVIADLFNGTYAKTINNSLPCSPDNCQAIVLYETEKLSIESLLYIKWQLEKYKGCNKVFFCCSDESKLHPIKPLCTTLRLSPPSSQE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00290 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 247 440 IPR027417 -
Adu08g00290 441 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 37 441 - -
Adu08g00290 441 Gene3D - 245 437 IPR027417 -
Adu08g00290 441 PANTHER OS10G0574500 PROTEIN 37 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00290 Adu-Chr8 5081928 5111887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00290 247 441 Core DNA Replication Machinery Family AT5G27740 26.866 9.91e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00290 K10756 - aip:110268739 475.322