Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00265 ATGGATCTAGCACTAGAGGAGCTACAATTCCTGAACATCTCAGAAATCTATTACCCTTTTTTTTCCTCTTCGCTTTTTCTCTCCTCTCTACCGCCGCCGCCGTCTTTGCCGTTGCTTCCCTCTACACCAACAAAGTTGTCTCCTTTTCCTCCACCGTCTCTGCAATCTCCAAAATCTTCAAGCATTTGTTCATCACTTACCTCTGGAACATTTTTTACTATTTGCAAGAGTTACCATCACCAAGAAATTGATAAGAGTGGTTTAGATGATCATCTTGATTCTCTTATCTCACATGTTCCTCTCTTCTCAATAACATTATCAACAATTTCAACGTTTGGTGTGATCGGTACGTTGTGGGTGCGGATTGCATCCTCTGATCCAAGAGACTGGTATAGAATACAACTTGGTCTCTTGGGAGTTGGGTTTGTCCATATGAAGCCCGCTACCACCAACATGGCTCAGCCGCAGAGTAATTGGGAGGCTGATAAAATGCTTGATGTTTACATCCATGATTATTTTGTAAAGAGAAAATTACATAACACTGCAAAAGCTTTTATGACAGAAGGCAAAGTTTCCACCGATCCTGTAGCAATTGACGCTCCTGGAGGATTTCTGTACGAGTGGTGGTCTGTCTTTTGGGATGTCTTCATCTCAAGGACAAACGAGAAACATTCTGAGGCTGCTGCAGCTTACATTGAGACCCAGCAAATGAAGGCTAGAGAACAACAACTTCAGATGCAACAATTGCAACTTATGCAGCAGCGCGGTGCACAGCTGCAACGCCGGGATCCTAATCATCCTCCTCTAGGTGGTTCCTTAAGTGCCATGAACTCTGAAGGAATGTTGGGGCAGCAACCAACAAATGTGTTGGCCATTAAAATGTATGAAGACCGAATGAAACACTCTCATTCAATGGAGTCAGAGGCATCTCCAACACTTATCGATGCAAATAGGATGGCCCTTCTTAAATCTGGAACAGGTCATCAAGGTCAGTTGGTCCATGGTAATTCAGGAAATATGTCTACTGCATTGCAGCAACTTCAGGCCCGGACTCCTTTGACAACTGACATCAAAGGAGAAGTCAATTTAGGTGCCACTCCCAAGAGTTTGCCTATGGATAACTCCGTGTACAGACAAGCAATTTTACAATCAAAATCCGGGCTAGGCGGCACAGGGTTAAATCCAGGGGTTACAAGTCTTCCACTAAAGGGGTGGCCCTTAACTGGTATTGATCAACTAAGACCTGGCGGTTTGGGCGTACAAGTTCAGAAGCCTAATTTGACAACTCAAAGCCAATTTCTTTTGGCATCACAACAGCAGCAAGTCTTAGCACAGTCTCAGGCACAAAACAACCTTGGAAGTTCTAATAGTCAAGGTGATATGGATCCACATAGACTTTCTACGGTCCCTCGGGGTGGCTTAAGTGCAAAAGATGGTCAATCTACCAGCTCCCAAGTGCAGTCAGGTTCACCTAAGGTTGAATTTGCTCTTCAAATATTAATGTGCCTGAATAACAACCGGAAAAGGAAACAACATTCTTCTTCTGGGCCTGGCAATAGCACTGGTACTGGAAACACAGTAGGTCCTTCACCTAATTCACCACCATCAACTCACACACCTGGTGATGGAATAAATACAGCAAGCAGCATGCAGCATGTTAACAGTATGCCAAAGAGTATGATGATGTATGGTACAGAAGCAACAGGTGGCCTTGCATCGTCTTCTAATTTGCTTGAGGATATGGACCGATTTGGAGATGTTGGTACTTTAGAGGATAATGTGGAATCCTTTCTATCAAATGATGGAGGAGATGAAGGTAGTCTCTATGGAAGTATAAAACAAAATCCGGCTGAGCAACAAAAGGAATCATCAAAAGGTAGTTTCACCTTTGCTGAATTTGGTTGCATACGAACAAGGAACAGCAAAGTTACTTGCTGTCATTTTTCATCTGATGGAAAATTACTTGCCAGTGCTGGACATGACAACAAGGTTGTCCTTTGGAACATGGACACTTTACAGACAGAGAGCACTCCAGAAGAACACAAGTTGGTTATTTCAGATGTCCGTTTTAGACCAAATTCATCTCAGTTGGCGACAGCCTCAATCGATAAATCTGTGCGGTTATGGGATGCAGCCAATCCAAGCTATTGTGTGCAAGAATACGGTGGGCACAGTGCAGCAATTATGTCTCTTGATTTCCACCCAAAGAAGACTGATATGTTCTGCTTTTGTGATAGTGAAAATGCAATTCGGTACTATGATATTACTTCATCCTCCTGCACGCATGTATTGAAGGGTGGAAATGCTCAAGTGCGGTTTCAGCCTAGAGTGGGGCAAGTACTAGCAGCAGCTTCTGACAAAGTAGTGTCAATTTTTGATGTTGAAACCGACAGACAAATTTATTCACTTCAGGGACACACTGAAGCGGTGAACTATATTTGCTGGGATGCAACTGGAGATTTCTTGGCAACTGTGAGTCAAAATTTGGTGAAGATTTGGACACTGGCCTCTGGAGAATGCATTCAGGAGCTTAGCTCAAATGCAAACCAGTTCCATTCTTGTGTCTTTCATCCAAGCTATTCAACTTTGTTGGTGATTGGAGGGTTTTCGTCCTTGGAGCTGTGGAACATGGCTGAGAACAAAAGCATGACAATTTCTGCACACGAGAATATAATTTCCGCTTTGGCTCAATCTCCTGTAACCGGTATGGTCGCCTCTGCAAGTCATGACTGCTCTGTTAAGTTATGGAAATAA 2754 0.4339 MDLALEELQFLNISEIYYPFFSSSLFLSSLPPPPSLPLLPSTPTKLSPFPPPSLQSPKSSSICSSLTSGTFFTICKSYHHQEIDKSGLDDHLDSLISHVPLFSITLSTISTFGVIGTLWVRIASSDPRDWYRIQLGLLGVGFVHMKPATTNMAQPQSNWEADKMLDVYIHDYFVKRKLHNTAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWDVFISRTNEKHSEAAAAYIETQQMKAREQQLQMQQLQLMQQRGAQLQRRDPNHPPLGGSLSAMNSEGMLGQQPTNVLAIKMYEDRMKHSHSMESEASPTLIDANRMALLKSGTGHQGQLVHGNSGNMSTALQQLQARTPLTTDIKGEVNLGATPKSLPMDNSVYRQAILQSKSGLGGTGLNPGVTSLPLKGWPLTGIDQLRPGGLGVQVQKPNLTTQSQFLLASQQQQVLAQSQAQNNLGSSNSQGDMDPHRLSTVPRGGLSAKDGQSTSSQVQSGSPKVEFALQILMCLNNNRKRKQHSSSGPGNSTGTGNTVGPSPNSPPSTHTPGDGINTASSMQHVNSMPKSMMMYGTEATGGLASSSNLLEDMDRFGDVGTLEDNVESFLSNDGGDEGSLYGSIKQNPAEQQKESSKGSFTFAEFGCIRTRNSKVTCCHFSSDGKLLASAGHDNKVVLWNMDTLQTESTPEEHKLVISDVRFRPNSSQLATASIDKSVRLWDAANPSYCVQEYGGHSAAIMSLDFHPKKTDMFCFCDSENAIRYYDITSSSCTHVLKGGNAQVRFQPRVGQVLAAASDKVVSIFDVETDRQIYSLQGHTEAVNYICWDATGDFLATVSQNLVKIWTLASGECIQELSSNANQFHSCVFHPSYSTLLVIGGFSSLELWNMAENKSMTISAHENIISALAQSPVTGMVASASHDCSVKLWK 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00265 917 MobiDBLite consensus disorder prediction 445 463 - -
Adu08g00265 917 MobiDBLite consensus disorder prediction 597 624 - -
Adu08g00265 917 ProSitePatterns Trp-Asp (WD) repeats signature. 655 669 IPR019775 -
Adu08g00265 917 CDD WD40 640 917 - -
Adu08g00265 917 PRINTS G protein beta WD-40 repeat signature 904 917 IPR020472 -
Adu08g00265 917 PRINTS G protein beta WD-40 repeat signature 655 669 IPR020472 -
Adu08g00265 917 PRINTS G protein beta WD-40 repeat signature 697 711 IPR020472 -
Adu08g00265 917 ProSiteProfiles LIS1 homology (LisH) motif profile. 161 193 IPR006594 GO:0005515
Adu08g00265 917 SUPERFAMILY WD40 repeat-like 634 917 IPR036322 GO:0005515
Adu08g00265 917 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 885 917 - -
Adu08g00265 917 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 156 917 - -
Adu08g00265 917 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 678 710 - -
Adu08g00265 917 ProSiteProfiles Trp-Asp (WD) repeats profile. 678 710 IPR001680 GO:0005515
Adu08g00265 917 Pfam LisH 163 189 IPR006594 GO:0005515
Adu08g00265 917 ProSiteProfiles Trp-Asp (WD) repeats profile. 636 677 IPR001680 GO:0005515
Adu08g00265 917 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 156 917 IPR044716 GO:0003714
Adu08g00265 917 SMART Lish 161 193 IPR006594 GO:0005515
Adu08g00265 917 Pfam WD domain, G-beta repeat 799 833 IPR001680 GO:0005515
Adu08g00265 917 Pfam WD domain, G-beta repeat 881 917 IPR001680 GO:0005515
Adu08g00265 917 Pfam WD domain, G-beta repeat 677 710 IPR001680 GO:0005515
Adu08g00265 917 Pfam WD domain, G-beta repeat 641 668 IPR001680 GO:0005515
Adu08g00265 917 MobiDBLite consensus disorder prediction 445 490 - -
Adu08g00265 917 Gene3D - 770 917 IPR015943 GO:0005515
Adu08g00265 917 SMART WD40_4 757 793 IPR001680 GO:0005515
Adu08g00265 917 SMART WD40_4 796 834 IPR001680 GO:0005515
Adu08g00265 917 SMART WD40_4 878 917 IPR001680 GO:0005515
Adu08g00265 917 SMART WD40_4 629 668 IPR001680 GO:0005515
Adu08g00265 917 SMART WD40_4 837 876 IPR001680 GO:0005515
Adu08g00265 917 SMART WD40_4 714 754 IPR001680 GO:0005515
Adu08g00265 917 SMART WD40_4 671 710 IPR001680 GO:0005515
Adu08g00265 917 MobiDBLite consensus disorder prediction 508 550 - -
Adu08g00265 917 MobiDBLite consensus disorder prediction 474 490 - -
Adu08g00265 917 Gene3D - 618 769 IPR015943 GO:0005515
Adu08g00265 917 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 636 671 - -
Adu08g00265 917 Coils Coil 232 252 - -
Adu08g00265 917 ProSiteProfiles Trp-Asp (WD) repeats profile. 885 917 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00265 Adu-Chr8 4482881 4494077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00265 654 902 U-box Gene Family AT2G33340 29.070 9.02e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Adu08g00265 WD40 0.0072 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00265 - - qsu:111995984 1144.03