Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00245 ATGCATGTGGGTATGGACTTTCCTCATCAATTTACTATGCTAGAAGGTGAAAATGATAAAGGAAATGTATTAGTTATGGAAGATGAGAAATCAGAAGATTTGAGTAATGTAAGACAAATGGCAAGGGGCAAACCTCCGCGCCACCTTGGCTCCGGCATGAGACATAGTATTAGCACCACTAGATTGGTTGCTGCACCAGATTTGAGTTTGGATGTGGAGGTTACAGGGTGCAAGTCATCTTCTGAAGACAACACAGAGTTTCTACCCATATTTCGGTCAGGAAGTTGTGCTGAAAAAGGACCTAAAGAATATATGGAAGATGAACATATATGCATAGATGATCTTATTCAGCATCTAGGTTCATCTTCAAATTTTCCTTTTACAGGAGCTTTCTATGGTGTGTTTGATGGGCATGGAGGTACAGATGCAGCTTCTTTTATAAGAAATAACATCCTTAGATTCATACTTGAGGACTCCCATTTTCCAACTTGCGTGGCAAAGGCAATTACAAGTGCTTTCTTGAAAGCTGATTATGCATTTGCAGATTCTAGTTCGTTAGATATCTCCTCTGGAACCACTGCTTTAACAACTCTTGTATATGGAAGGACCATGATGGTCGCCAATGCCGGGGACTGTAGAGCTGTACTGGGGAGGCGAGGTAGAGCGGTCGAGATGTCAACAGACCAGAAACCAAATCGTATTTCAGAGAGGCTGAGGATTGAGAGGCTTGGTGGTGTAGTATACGATGGATACTTGAACGGGCAGCTGTCGGTTTCCCGTGCTCTAGGAGACTGGCACATGAAAGGTCCCAAGGGCTCTGCATGCCCTCTGAGCGCAGAACCTGAGTTGCAAGAAATCAACCTGAGTGAGGACGACGAGTTCTTGATAATGGGTTGTGATGGATTATGGGACGTGATGAGTAACCAATGCGCTGTGACAATGGCAAGGAAAGAATTAATGATACATAATGATCCTGAAAGGTGTTCAAGAGAGCTGGTCAGAGAGGCTCTTAAGCGCAACTCTTGTGATAACTTAACAGTGATCGTGGTGTGTTTCTCACAAGATCCTCCTCCAAGAATAGAGACACCACCTTCTCGAGTCAGAAGGAGCATATCTGCAGAAGGCCTCAATTTACTCAAGGGTGTATTGGACTCTTAG 1158 0.4404 MHVGMDFPHQFTMLEGENDKGNVLVMEDEKSEDLSNVRQMARGKPPRHLGSGMRHSISTTRLVAAPDLSLDVEVTGCKSSSEDNTEFLPIFRSGSCAEKGPKEYMEDEHICIDDLIQHLGSSSNFPFTGAFYGVFDGHGGTDAASFIRNNILRFILEDSHFPTCVAKAITSAFLKADYAFADSSSLDISSGTTALTTLVYGRTMMVANAGDCRAVLGRRGRAVEMSTDQKPNRISERLRIERLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELQEINLSEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPERCSRELVREALKRNSCDNLTVIVVCFSQDPPPRIETPPSRVRRSISAEGLNLLKGVLDS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00245 385 CDD PP2Cc 91 352 IPR001932 -
Adu08g00245 385 PANTHER PROTEIN PHOSPHATASE 2C 1 374 IPR015655 GO:0004722|GO:0006470
Adu08g00245 385 Pfam Protein phosphatase 2C 93 344 IPR001932 -
Adu08g00245 385 SUPERFAMILY PP2C-like 86 353 IPR036457 -
Adu08g00245 385 ProSitePatterns PPM-type phosphatase domain signature. 131 139 IPR000222 GO:0043169
Adu08g00245 385 ProSiteProfiles PPM-type phosphatase domain profile. 92 352 IPR001932 -
Adu08g00245 385 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 374 - -
Adu08g00245 385 SMART PP2C_4 82 350 IPR001932 -
Adu08g00245 385 Gene3D - 71 356 IPR036457 -
Adu08g00245 385 MobiDBLite consensus disorder prediction 31 53 - -
Adu08g00245 385 SMART PP2C_SIG_2 107 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00245 Adu-Chr8 4145118 4147503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00245 3 384 PP2C-type Phosphatase Gene Family AT2G33700 71.094 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00245 K14803 - gmx:100778015 647.506