Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00230 ATGAGCTGCTTCTCGTGCTTTGTTTCTCGCGCCAAAGATGCCAGCAGAGTCGAAATTGACACTGGTTCTCGATCTGCTTCCTCAGGCTCTGGTGGAGGGAAATACACTGCTGCTACTGAGAGTGAAAGGAGGAAGAAGGAATCGTATTCGGAGGGGAAGGGGAAGAGTACGAGTAATGGGAAAAGCAGCACGGCGGCGGCGAGCTTTGGATTCCGAGAGCTGGCGGCGGCAACACGGGGTTTCAACCAAGTCAATTTGATCGGTGAGGGCGGTTTCGGACGCGTTTACAAGGGTCGCCTCTCTACTGGCCAGGTTGTTGCCATAAAGCAGTTAAGTCATGATGGTCATCAGGGCTTTCAGGAATTTGTGATGGAGGTTCTTATGTTAAGCCTTCTTCACCATTCTAACCTTGTCAGGCTCATAGGTTATTGCACCGATGGAGATCAAAGGCTTTTAGTTTATGAGTATATGCCTATGGGTTGCCTTGAAGATCATCTCTTTGATCCTCCCCAAGACAAAGAACCACTAAGTTGGAGTACACGGATGAAGattgctgttggggctgcccgaggccttgagtatctccattgtagagctgatccgccagttatttatcgagacttgaagtctgcaaatatcttattagacaatgaattcaatcccaaactgtcagattttgggcttgctaaacttggacctgttggagacaatacccatgtttcaacaagggtgatgggaacatatggctactgtgcaccagaatatgccatgagtggcaaattaacacttaaatctgatatatacagctttggcgtggttttgttggagttgatCACTGGGCGTAGGGCAATAGATAGTAGCAGAAGACCAGGGGAGCAAAACTTAATTTCATGGGCTCGCCCATGTTTTGGGGACCGGAGAAAGTTCATACAATTGGTTGATCCCCTTTTGCAAGGGAACTTCCCCTTGCGCTGTTTACATCAGGCAATTGCCATTACTGCAATGTGTCTACAGGAGCAACCAAAAGTCCGGCCGCTAATCGGTGATATTGTTGTTGCATTGGAGTACCTAGCCTCTCAGAGTATCCCTGAACATCATAGACAGAACCCACCATTGCAATATTCAGAAATCGACAGAAGTTAA 1143 0.3631 MSCFSCFVSRAKDASRVEIDTGSRSASSGSGGGKYTAATESERRKKESYSEGKGKSTSNGKSSTAAASFGFRELAAATRGFNQVNLIGEGGFGRVYKGRLSTGQVVAIKQLSHDGHQGFQEFVMEVLMLSLLHHSNLVRLIGYCTDGDQRLLVYEYMPMGCLEDHLFDPPQDKEPLSWSTRMKIAVGAARGLEYLHCRADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDSSRRPGEQNLISWARPCFGDRRKFIQLVDPLLQGNFPLRCLHQAIAITAMCLQEQPKVRPLIGDIVVALEYLASQSIPEHHRQNPPLQYSEIDRS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00230 380 SUPERFAMILY Protein kinase-like (PK-like) 63 355 IPR011009 -
Adu08g00230 380 CDD STKc_IRAK 87 355 - -
Adu08g00230 380 PANTHER OS07G0668900 PROTEIN 1 363 - -
Adu08g00230 380 Gene3D Phosphorylase Kinase; domain 1 39 156 - -
Adu08g00230 380 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
Adu08g00230 380 MobiDBLite consensus disorder prediction 13 63 - -
Adu08g00230 380 SMART serkin_6 81 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00230 380 Pfam Protein kinase domain 82 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00230 380 Gene3D Transferase(Phosphotransferase) domain 1 157 374 - -
Adu08g00230 380 ProSiteProfiles Protein kinase domain profile. 81 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00230 380 MobiDBLite consensus disorder prediction 20 35 - -
Adu08g00230 380 PANTHER OS07G0668900 PROTEIN 1 363 - -
Adu08g00230 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Adu08g00230 380 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00230 Adu-Chr8 3853481 3856959 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00230 1 371 Glycoside Hydrolase AT3G07070 58.400 1.60e-155 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Adu08g00230 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00230 - - gmx:100796595 575.859