Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00227 ATGGGAAACTGTTTCCGGAAGGCGAGTAATAACAAGATTAATGAGCATCGTCATGCTACTAATTCCAATAATAATAATAATAAACCACCTGCAGAAAGTAGGAAGGAGAAGGGAGTGATGAAGAAGGTGACGCCGAATCTGAGAATATTTACATTGGATGAGCTGAAAACTGCGACAAGGAATTTCAGACCGGACACTATGTTAGGTGAGGGTGGTTTTGGTCGCGTCTTTAAAGGATGGATTGACCAAAATACCCTCAAGCCTTCCAAAGTCGGAGTTGGAATTCCGGTTGCCGTTAAGAAGTCTAACCCCGACAGCCTCCAAGGCCTCCAAGAATGGCAGAGTGAGGTGAAATTCTTGGGGAAGTTTTCTCATCCAAACCTGGTTAAACTAGTTGGATATTGTTGGGAGGAGAATCAATTCTTGCTAGTATACGAATACATGCAAAAGGGCAGCTTGGAAAACCACCTCTTCAGAAGCCCAGAACCGCTTTCATGGGATATAAGGGTGAAGATAGCCATTGGAGCTGCGAGAGGCTTGGATTTCTTACACACGTCAGAGAAATCTGTAATCTATAGAGACTTCAAGTCCTCTAATATTCTTCTTGACGGGGATTACAACGCAAAGCTGTCGGACTTTGGATTGGCAAAGCTTGGCCCAGTTAACGGCAGATCCCATGTAACCACACGTGTCATGGGAACCTACGGTTATGCCGCCCCTGAGTATATGGCAACAGGTCATTTGTACGTAAAAAGTGATGTATACGGATTTGGCGTAGTCCTACTAGAAATGTTAACAGGCCTAATTGCTTTGGACACAAATAGGCCCTCAGGTCAACAGAATTTAGTAGAGTGGGTTAAGCCCTCTCTTTACGAGAAAAGGAAATTAAAAAATAGAATGGATCCAAATTTGAGTGAACAATATCCCAAAAAAGCTGCTTTTGAGATAGCACAGCTTATATTACAATGCTTGGAAGAAGATCCAAAGAACCGACCATCCATGGAACAAGTCTTACAAACATTAGAGAAGGTACAAAGCATAAGATATAAACCCAAAGTGAAGAAAGACAGTGGCATAATGCATCATCAACAACGTCATCACTCTCCTTCCCCTCAAAATTAG 1122 0.4251 MGNCFRKASNNKINEHRHATNSNNNNNKPPAESRKEKGVMKKVTPNLRIFTLDELKTATRNFRPDTMLGEGGFGRVFKGWIDQNTLKPSKVGVGIPVAVKKSNPDSLQGLQEWQSEVKFLGKFSHPNLVKLVGYCWEENQFLLVYEYMQKGSLENHLFRSPEPLSWDIRVKIAIGAARGLDFLHTSEKSVIYRDFKSSNILLDGDYNAKLSDFGLAKLGPVNGRSHVTTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLIALDTNRPSGQQNLVEWVKPSLYEKRKLKNRMDPNLSEQYPKKAAFEIAQLILQCLEEDPKNRPSMEQVLQTLEKVQSIRYKPKVKKDSGIMHHQQRHHSPSPQN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00227 373 ProSiteProfiles Protein kinase domain profile. 62 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00227 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Adu08g00227 373 Gene3D Transferase(Phosphotransferase) domain 1 148 366 - -
Adu08g00227 373 ProSitePatterns Protein kinases ATP-binding region signature. 68 101 IPR017441 GO:0005524
Adu08g00227 373 PANTHER OS01G0588500 PROTEIN-RELATED 13 364 - -
Adu08g00227 373 Pfam Protein tyrosine and serine/threonine kinase 66 341 IPR001245 GO:0004672|GO:0006468
Adu08g00227 373 Gene3D Phosphorylase Kinase; domain 1 46 147 - -
Adu08g00227 373 CDD STKc_IRAK 68 343 - -
Adu08g00227 373 MobiDBLite consensus disorder prediction 1 39 - -
Adu08g00227 373 MobiDBLite consensus disorder prediction 352 373 - -
Adu08g00227 373 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 13 364 - -
Adu08g00227 373 MobiDBLite consensus disorder prediction 1 29 - -
Adu08g00227 373 SUPERFAMILY Protein kinase-like (PK-like) 47 355 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00227 Adu-Chr8 3831803 3834137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00227 3 341 Glycoside Hydrolase AT3G07070 45.706 4.31e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu08g00227 PK_Tyr_Ser-Thr 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00227 - - aprc:113865973 551.592