Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00206 ATGCGTGTTTGGGTGTGCGTGTGTCTGAAGAAGCTGCTTCAAACACACTCACACCAACGGAAACATAACGGAGTTTACGTTATCTGCTTCCAACTAATGGGTTGTTGCCAATCTAATTCGAGCCGTCATAACTACCCTCGTCCGCTTACGGTTGCTTCCTCCCCTAACGGCGCCAACAACAATAACAACAATAACACCGTCGTTACTGGTGCCTCCGCCGCTGCCTCTGCCGCCCTAGACGTCCCTCCTTTCTCTGAGTTCTCCCTCTCCGACCTCAAATCGGCCACCAACGGCTTCAGCTCCGATCACATCGTCTCCGAGAGCGGCGACAAAGCCCCCAATGTGGTCTATAAGGGTCGCCTCAACAATCATAACCGACGTTTGATTGCCGTCAAGAGATTCTCCAAATCGGCATGGCCCGACCCCAAGCAGTTCGCTGATGAGGCTTGGAGTGTTGGGAAATTGAGGCACCCTAGGCTTGCGAATTTGATTGGGTATTGCTGTGATGGGGATGAGAGGCTTCTCGTTGCAGAATATATGCCCAACGACACTCTCGCCAAACATCTTTTTCATTGGGAAAATCAGACAATTGAGTGGAGCATGCGATTAAGAGTTGCCCTGTCCATCACACAAGCATTGGATTATTGCAGTAACAAAGGTCACCCATTGTACCATGATCTGAATGCCTACAGAGTGCTATTTGATGAGAATGGTGATCCGAGGATTTCATGTTTTGGGCTGATTAAGAACAGTAGGGACGGAAAAAGTTATAGCACGAATCTTGCTTATACCCCTCCAGAGTACCTGAGAAACGGGAGGGTGACTCCAGAAAGTGTAATCTTCAGTTTTGGAACTGTGTTATTGGATCTACTAAGCGGCAAGCATATCCCTCCAAGTCATGCTCTTGACATGATAAGGGGTAAAAATATTCTACGTCTAATGGATTCACACTTGGAGGGAAACTTTTCCACCGATGAGGCAACTGTGGTTTTCGACCTTGCCTCAAAGTGCTTGCAATATGAACCTCGAGAGCGGCCCAAGATCAATGACCTTGTTACAACTCTGTCCAGACTGCAGAATAAACCCGATGTTCCATCATATGTCATGCTTGGCATTCCAAAGCACGAGGAAGCACCAGCACCGCCAACTCCCCAGCATCCTCTATCTCCAATGGGTGATGCTTGTTCTCGCATGGACCTTACAGCTATTCATCAGATATTGTTGATGACACACTATAAAGATGATGAAGGAACTAATGAGTTATCTTTCCAAGAATGGACTCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGGGGAGACCTGGCATTCCGTGATAAGGATTTCAAAACTTCAATTGAGTGTTACTCCCAGTTCATTGATGTGGGAACCATGGTTTCCCCAACCGTTTATGCGCGGAGAAGTCTTTGCTACCTGTTTTGCGATCAACCGGATGCTGCGCTGCGGGATGCAATGCAAGCTCAGTTGGTCTATCCGGACTGGGCGACAGCATTTTACATGCAGGCTGTTGCTCTGTCCAAATTAAACATGGATAAGGATGCAGCTGACATGCTGAACGAGGCCGCTTCCTTAGAAGAGAAACGGCAAAGAGGAGGGAAATGA 1623 0.4787 MRVWVCVCLKKLLQTHSHQRKHNGVYVICFQLMGCCQSNSSRHNYPRPLTVASSPNGANNNNNNNTVVTGASAAASAALDVPPFSEFSLSDLKSATNGFSSDHIVSESGDKAPNVVYKGRLNNHNRRLIAVKRFSKSAWPDPKQFADEAWSVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWSMRLRVALSITQALDYCSNKGHPLYHDLNAYRVLFDENGDPRISCFGLIKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILRLMDSHLEGNFSTDEATVVFDLASKCLQYEPRERPKINDLVTTLSRLQNKPDVPSYVMLGIPKHEEAPAPPTPQHPLSPMGDACSRMDLTAIHQILLMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTSIECYSQFIDVGTMVSPTVYARRSLCYLFCDQPDAALRDAMQAQLVYPDWATAFYMQAVALSKLNMDKDAADMLNEAASLEEKRQRGGK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00206 540 Pfam Protein tyrosine and serine/threonine kinase 115 355 IPR001245 GO:0004672|GO:0006468
Adu08g00206 540 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 33 539 IPR045845 GO:0004672|GO:0009742
Adu08g00206 540 Gene3D Phosphorylase Kinase; domain 1 75 179 - -
Adu08g00206 540 Gene3D Transferase(Phosphotransferase) domain 1 181 372 - -
Adu08g00206 540 SUPERFAMILY Protein kinase-like (PK-like) 82 366 IPR011009 -
Adu08g00206 540 Coils Coil 514 534 - -
Adu08g00206 540 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 33 539 - -
Adu08g00206 540 SUPERFAMILY TPR-like 436 533 IPR011990 GO:0005515
Adu08g00206 540 Gene3D Tetratricopeptide repeat domain 431 538 IPR011990 GO:0005515
Adu08g00206 540 ProSiteProfiles Protein kinase domain profile. 102 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00206 Adu-Chr8 3380184 3384764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00206 56 381 Glycoside Hydrolase AT3G07070 32.011 1.54e-45 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Adu08g00206 PK_Tyr_Ser-Thr 7.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00206 K14500 - qsu:111999979 847.04