Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00198 ATGGTGGCTGACCATTTTCGTGCACAAACTCATTTAGATCTTGACGTGATTCGCATTGATAGGACATTGGTCTTTTATGAGAAGAGGGCCAAGAAGGTGGCAGTTGGAGGTGGTGAGGTGTCGGTGTCATCGGTGGTTGAAACTGTGAGTTGTAGTGCTAATGGAAGGCCATTTGAGGTTGTGTACTATCCAAGGGGAAGTTCACCTGAGTTTTGTGTTAAGGCTTCAGTTGTGAGAGATGCAATGAAAGTGAGGTGGTGTTCTGGGATGAGGTTCACGATGCCCTTTGAGACTAAGGATTCTTCTAGAATCAGTTGGTTCCTGGGAACCATTTCTTCTGTTCAGCTTCTTGATCCCATTCATTGGCCTAATTCTCCATGGCGTCTTCTGCAGATCGGATATAGTAAGGTAGACATCCTCTGCTCAGAAAGCGGGAAGCAAGATAGACTGCCAATTGGATATGCATTTGGTGGCGGCATGTTCGAGATAAATGAAGTGAAGGGTGGCAGTTCGTACGGTGCCCGAACTTATGCTGGTGGTGATGGATTAAGACAACCAACTAAACTTGAGTTGGAGCAAGCATTCCACCAAGGCAAGTATATTGCCACCATCACTAAGAAGTTCAAGAAAGAATGA 636 0.456 MVADHFRAQTHLDLDVIRIDRTLVFYEKRAKKVAVGGGEVSVSSVVETVSCSANGRPFEVVYYPRGSSPEFCVKASVVRDAMKVRWCSGMRFTMPFETKDSSRISWFLGTISSVQLLDPIHWPNSPWRLLQIGYSKVDILCSESGKQDRLPIGYAFGGGMFEINEVKGGSSYGARTYAGGDGLRQPTKLELEQAFHQGKYIATITKKFKKE 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00198 211 Pfam Auxin response factor 52 131 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu08g00198 211 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 35 140 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu08g00198 211 SUPERFAMILY Flavoproteins 150 208 IPR029039 -
Adu08g00198 211 PANTHER AUXIN RESPONSE FACTOR 16 35 140 - -
Adu08g00198 211 Gene3D - 82 146 - -
Adu08g00198 211 Gene3D - 149 211 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00198 Adu-Chr8 3207933 3209735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00198 38 140 B3 DNA Binding Superfamily AT4G30080 62.136 1.75e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00198 - - adu:107491554 183.726