Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00194 ATGGCGAGGTTCTTAGTAGACAAAGGATTGAATGTCAAAGAGGCTTCAGTTCCTGGTTTTGATGATGAGCTTTGGGCTCACTTCTACTACCTTCCAACTAGGTATGCGTTGGATATGAACGTGGAGAGGGCACAAGATGTGCTTATGCACAAAAGGTTGCTTCACATGGCACGATTCCCTACTATTGCAACTGGACCTGCAATTGAAGTTCGTCTTGTTCAGGTTCGTGCTTCTTCTGCTGTACGCAGTCCTCAATATTTTGATACTCCAGCCACAATGATGAGCTTCCATCCACCCCCAGCCTTTGCTTCATCAGCTAATCTTGAACTTGATCTATGCAAAAGTCAGTTACAAGCTGAAGATAAGAGTAACAATTTCAATTTTTACGCACACTATGCCAGTAATTCATGCAGGCCAGTGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTCCTCAGCCAGTTAACTTCTTTAATCTCTGAGACTGGGCTTGACATTCAAGAAGCACATGCTTTTTCGACGTTGGATGGATACTCTCTGGATGTTTTTGTTGTTGGTGGTTGGGCAGTTGAGGAGACAGAGAAATTAAAGCATGTACTAGCAAAGAAAATGAAAAAACTCGAGCAACCTCAGTTGAAAGAAAATGGCACTATTAATACTGCAGAGCAAGGGAATACTGGGTTCAAATTTATATCTAGTCATGTAAATTTTGCTACTAATCGAAATGATGTCTGGGATGAAAGATGTTTGAGATGTGAAAAGAAAATTGCATCTGGATCTTTCAGTGATCTGTATAAGGGTATTTTCTGTAATCAAGATGTGGCTATCAAAGTTCTTAAGGACGATAATTTGAATGAAAATATACAGAGGGAGTTTTATCAAGAAATCTATATCCTAAGTAAAATTCAACATAAAAATGTCGTGAGATTTTTTGGTGCCTGTACAAAACCCCCTAACCATTACCTTATCACAGAATATATGTCTGGTGGAAGTATGTATGACTTTCTTCATATAAAGAAGGCTGCGCTTTCTCTCCCATGGTTGATTAAAGTTGCCATTGAGGTTTCAGAAGGAATGAAATATTTGCATCAGAATGATATCATACATCGAGACCTCAAAACAGCTAATCTCTTGATGGATGATAAAGGGGTAGTTAAGGTTGCTGATTTTGGGGTGGCTAGAGTGAACAATCAATCCGGGGTGATGACTGCAGAAACTGGAACTTATCGATGGATGGCTCCGGAGGTGATTGAGCATAAACCATATGATCACAAATCCGATGTTTATAGTTTCGGCATTGTCCTTTGGGAGCTTCTCACAGGAAAGCTTCCTTATGAGCATTTGTCCCCATTGCATGCGGCAGTTGGAGTGGCCCAAAAGGGTTTGAGGCCGGAAATTCCAAGGCACACGCATCCAATGTTGGTGGAATTAATTCACCGGTGCTGGCACCAAGATCCATCTTCAAGACCCGATTTCACAGAAATTCTGGAATTTCTGTTGCACATAACCATGAAGGTTGCTGGGAAAGGTGAGGTAAAGGAAATGTATGAAACGTTTTCAGGCTGA 1572 0.4078 MARFLVDKGLNVKEASVPGFDDELWAHFYYLPTRYALDMNVERAQDVLMHKRLLHMARFPTIATGPAIEVRLVQVRASSAVRSPQYFDTPATMMSFHPPPAFASSANLELDLCKSQLQAEDKSNNFNFYAHYASNSCRPVHEITISTNDKPKLLSQLTSLISETGLDIQEAHAFSTLDGYSLDVFVVGGWAVEETEKLKHVLAKKMKKLEQPQLKENGTINTAEQGNTGFKFISSHVNFATNRNDVWDERCLRCEKKIASGSFSDLYKGIFCNQDVAIKVLKDDNLNENIQREFYQEIYILSKIQHKNVVRFFGACTKPPNHYLITEYMSGGSMYDFLHIKKAALSLPWLIKVAIEVSEGMKYLHQNDIIHRDLKTANLLMDDKGVVKVADFGVARVNNQSGVMTAETGTYRWMAPEVIEHKPYDHKSDVYSFGIVLWELLTGKLPYEHLSPLHAAVGVAQKGLRPEIPRHTHPMLVELIHRCWHQDPSSRPDFTEILEFLLHITMKVAGKGEVKEMYETFSG 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00194 523 ProSiteProfiles ACT domain profile. 142 221 IPR002912 -
Adu08g00194 523 Gene3D Transferase(Phosphotransferase) domain 1 331 520 - -
Adu08g00194 523 Gene3D Phosphorylase Kinase; domain 1 248 330 - -
Adu08g00194 523 CDD STKc_MAP3K-like 258 501 - -
Adu08g00194 523 Pfam Protein tyrosine and serine/threonine kinase 253 501 IPR001245 GO:0004672|GO:0006468
Adu08g00194 523 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 505 - -
Adu08g00194 523 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Adu08g00194 523 PRINTS Tyrosine kinase catalytic domain signature 326 339 IPR001245 GO:0004672|GO:0006468
Adu08g00194 523 PRINTS Tyrosine kinase catalytic domain signature 428 450 IPR001245 GO:0004672|GO:0006468
Adu08g00194 523 PRINTS Tyrosine kinase catalytic domain signature 409 419 IPR001245 GO:0004672|GO:0006468
Adu08g00194 523 PRINTS Tyrosine kinase catalytic domain signature 363 381 IPR001245 GO:0004672|GO:0006468
Adu08g00194 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Adu08g00194 523 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 8 505 - -
Adu08g00194 523 ProSiteProfiles Protein kinase domain profile. 252 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00194 523 SMART serkin_6 252 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu08g00194 523 SUPERFAMILY ACT-like 138 210 IPR045865 -
Adu08g00194 523 SUPERFAMILY Protein kinase-like (PK-like) 240 501 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00194 Adu-Chr8 3156906 3160534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00194 11 508 MAP Kinase Kinase Kinase AT2G17700 55.709 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Adu08g00194 PK_Tyr_Ser-Thr 2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00194 - - aprc:113864606 733.406