Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00148 ATGGAAATAGAAGAGCAAGGAGGAGGTATGACGTCATCAAGGTTCAGGCGCATCTGTGTATACTGCGGAAGCAGCCCCGGCAAGAACCCCAGCTACCAACTCGCCGCAATTCAGCTCGGCCAACAACTGGTGGAAAGGAACATTGACTTGGTATATGGAGGAGGAAGCATTGGCTTGATGGGTCTAATCTCCCAAGTTGTCTATGATGGGGGACGCCACGTGTTAGGAGTGATTCCAAAGACGCTCATGCCAAGAGAGTTAACTGGAGAGACAGTGGGGGAAGTAAGAGCAGTTTCAGGAATGCACCAACGCAAGGCTGAAATGGCCAGACAAGCTGACGCTTTTATTGCTTTGCCAGGTGGATACGGAACCCTCGAAGAGCTTTTGGAAATCATCACCTGGGCTCAACTAGGAATCCATGACAAACCGGTGGGGTTGTTGAACGTGGATGGCTACTATAACTCGTTGCTGGCATTCATGGATAAAGCTGTGGACGAAGGTTTTGTAACACCAGCTGCCCGTCACATTATTGTCTCTGCCCAAACTGCCCAAGACCTCATGTGCAAGCTTGAGGTACGGAAACATATACACAATAATACACACGCACTACTCAATTTGCAAAGTTTATTTTACTAA 636 0.4827 MEIEEQGGGMTSSRFRRICVYCGSSPGKNPSYQLAAIQLGQQLVERNIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLMPRELTGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTAQDLMCKLEVRKHIHNNTHALLNLQSLFY 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00148 211 SUPERFAMILY MCP/YpsA-like 13 190 - -
Adu08g00148 211 PANTHER LOG FAMILY PROTEIN YJL055W 10 199 - -
Adu08g00148 211 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 10 199 - -
Adu08g00148 211 Gene3D - 6 192 - -
Adu08g00148 211 Pfam Possible lysine decarboxylase 60 189 IPR031100 -
Adu08g00148 211 TIGRFAM TIGR00730: TIGR00730 family protein 17 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00148 Adu-Chr8 2294060 2296149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00148 K22522 - gmx:100814612 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00148 08 2294060 2296149 Adu08g00148 08 2294060 2296149 ECH
Adu06g01271 06 17299997 17303725 Adu08g00148 08 2294060 2296149 PCT