Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00142 ATGTCTGCATTTTCTTCTGACAAATCCATTGCTTCTGTTTCCTCCATCAGAACGGCAGCAGGGGCATGTTGGTACTTGTTGGGGGTGCAGAGGGCAGCAAAGTGCCTAAAAGAGCAGTGTAGAAAGACAGATGGTTGTGGAGTGAGAAGCTTATCTTGCAAGCAGCATATAAATTATGGAAGCAATGGGATGGTGAAGGAGAAGCCAAGGTTGGCTTGGGCAGCAAATAGGGAAGCAAGGTCAACATGCCTTGATGGCCTTGACAACTATGACTATGGTGCTTATCAATGGACCGTCCAGCTTGTCACCAATGATAGCCGCTTGGAAAATATCCTCTTTCCTATCTTATGGGGCCTCATGACTCTCAGGTTCGATCAATGTTCAATCTCCCTACTATCATTAAAAGGAGTCAAGGATGCTGGATATGAGAAGATGACTATTGTACAGGTAAGGATGTCCTTGCCAAGGCTAGAACAGGCGCGGGGAAAACAGTTGCCTTTTTGCTTTCATCAATTGAAGTTGTTGCAAATTCACCACCAACTGAACGTGATCATAGGCGGCCACCTTGTCATATGTCCAACTCGAGAGCTTGCAAGCCAAGCGGCTACAGAAGCTGCTGAATTACTTAAGTATCATCCTACCATTGGTGTTCAGATCCTTGTTGCTACACTTGGAAGGCTTAGAGATCATGCGGAGAATACTGCTGGCTTTGCAACTCAGCTGATGGGTGTGAAAGTGTTGGTGCTCGATGAAGCTGATCATTTACTGGACATGGGATTTCAGAAAGATATTTTGAATACAGAGTTtatattttga 816 0.4473 MSAFSSDKSIASVSSIRTAAGACWYLLGVQRAAKCLKEQCRKTDGCGVRSLSCKQHINYGSNGMVKEKPRLAWAANREARSTCLDGLDNYDYGAYQWTVQLVTNDSRLENILFPILWGLMTLRFDQCSISLLSLKGVKDAGYEKMTIVQVRMSLPRLEQARGKQLPFCFHQLKLLQIHHQLNVIIGGHLVICPTRELASQAATEAAELLKYHPTIGVQILVATLGRLRDHAENTAGFATQLMGVKVLVLDEADHLLDMGFQKDILNTEFIF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00142 271 Gene3D - 119 267 IPR027417 -
Adu08g00142 271 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 186 271 IPR014001 -
Adu08g00142 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 265 IPR027417 -
Adu08g00142 271 Pfam DEAD/DEAH box helicase 188 264 IPR011545 GO:0003676|GO:0005524
Adu08g00142 271 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 18 123 - -
Adu08g00142 271 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 18 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00142 Adu-Chr8 2139871 2141815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00142 19 122 Ion Channels AT5G54250 69.231 4.68e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00142 K05391 - ahf:114924390 244.202