Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00141 ATGAAGGAACAATCAGGCACGCCCCTTGCATCGTTGCCTCGGCCTCAACCTCAGGTGGAGTGGAATGAGCTTGGATATAGTTCATGGGACACTCAGACTTCTCAAAATCTTAAGAGGCCATTAGAAGCTACATTGTTGGAGAACACTTTCCTAACAAGTCCCTGCATGCCACATTATGATAATGGAACTGTTGAAATGAATATTCATTTGAAACCTCAACTTGGAAACAACACTAGATCCCGTTTATGGATTCCTCAGCAAGAAGAATCTGTTGCTAAGAGAGCTCTCTTACAACAGATGAACGCAACGCTGCCTAAGGTTAACAGAAAAGGTCATCTTGCAGGTTCAGGTTCAGGTTCAGTTAGCATAATACCACAGAATGATCAACATTTTCTAACTGAACTAGATCAACATTCTTTTGAAATTGATAATCATTTGTCTCCTGACATTTCTAAATTAGAATCTGAGGTGTTAAGTGATCCTGTTAACCCTCAAAGTCAAAATTGGAGTTCATCAGTGGTTGGTATTCCCCAATCTGATTCTGCCACTGTGAATGGCCTAATTCCTCAGCAAGATACAGATGAATGGATGGTGCATTCTTCTTGCCAACAAGGATTGCAAGAACATCGTATATTAAGATCTGAAGCAGTTTTGAGGAATCTCTCAGCTAAGAGCAACAATCCTGGTGAAATTTGGGGTAACACCAGTGTTGATGTTAGCAGTGCAAGTGCCACCATGGTTGAGCCTTCGAATTCAAGTGCCATTTTGGATGAATTTTGCACACTTCAGGACAAGGATTTTCAGAAACTATCAGATTGCATCGTGAGCAACTTCAGTATGAGCCAGGATGTCCAGTCACAGATAACATCAGCAAGTCTAGCTGAGTCCCATGTGTTTTTTGTGCAAGACCTCGCCATCGACGCAGGTGGTGCATCTTCAAGCCATGCTGATTTTAATGAATGCAGCTTTCTGCAAAATAATTCAAGGCCGCGAGTAGCTTCGAAAGCTCCACCCAGGCGTACCTATACTAAGGTACAAAGGGCTGGTTCTGTAGGAAGATCAATTGATGTCACTGCTTTCAAGAACTATGAGGAACTGATACATGCAATTGAATCCATGTTCGGACTCGAGGGTCTGCTTAATGACGACACCAGAGACAGAGATTCAGAATGGAAGTTAGTATATGTTGATTACGAGAATGATGTTCTACTTGTTGGGGATGATCCTTGGGGGGAATTTGTGAACTGCGTCCGCTGCATCAGAATTTTGTCACCTACAGAGCTTAAGAAGATGAGCAAAGAGGGAATGCAGCTTCTAAATAGTGGTGCATTGCAACGGATCAATGGTCACATGCACTAA 1359 0.4253 MKEQSGTPLASLPRPQPQVEWNELGYSSWDTQTSQNLKRPLEATLLENTFLTSPCMPHYDNGTVEMNIHLKPQLGNNTRSRLWIPQQEESVAKRALLQQMNATLPKVNRKGHLAGSGSGSVSIIPQNDQHFLTELDQHSFEIDNHLSPDISKLESEVLSDPVNPQSQNWSSSVVGIPQSDSATVNGLIPQQDTDEWMVHSSCQQGLQEHRILRSEAVLRNLSAKSNNPGEIWGNTSVDVSSASATMVEPSNSSAILDEFCTLQDKDFQKLSDCIVSNFSMSQDVQSQITSASLAESHVFFVQDLAIDAGGASSSHADFNECSFLQNNSRPRVASKAPPRRTYTKVQRAGSVGRSIDVTAFKNYEELIHAIESMFGLEGLLNDDTRDRDSEWKLVYVDYENDVLLVGDDPWGEFVNCVRCIRILSPTELKKMSKEGMQLLNSGALQRINGHMH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00141 452 SUPERFAMILY CAD & PB1 domains 353 422 - -
Adu08g00141 452 ProSiteProfiles PB1 domain profile. 340 427 IPR000270 GO:0005515
Adu08g00141 452 Gene3D - 337 432 - -
Adu08g00141 452 PANTHER AUXIN RESPONSE FACTOR 5 122 446 - -
Adu08g00141 452 Pfam AUX/IAA family 334 429 IPR033389 -
Adu08g00141 452 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 122 446 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00141 Adu-Chr8 2132395 2134211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00141 241 444 B3 DNA Binding Superfamily AT1G19850 59.524 1.88e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu08g00141 AUX_IAA 1.5e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00141 K14486 - adu:107460158 911.753