Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00133 ATGGGAAGACCGGCCTCCTGCTTCAAGCTAATTATATGCGGCGGCGATGCGGCGGAGAAGGACGATTACCAAGTAGCTCAGATCAAGGATTCTAATGATAAACGTGGTTGGAGTTTCCGCAAGAAATCTGTTACTGCAAAGCAACGTGTGCTTAGCAATACTGTGACTGCAGATTCCTCATCTGCAAATAAGGAGAGTTCACAATGTAATAGTTTTAATTTTGAACCTAACGTTGTTGACAAGGTTTACACAACAAATAACTCTGATAAGAAGCCCAATTTATCCTCCATTGAAAGTTCAGAAACGAATGTCATTGAAGCAGAGAGTAAAAAGGACGTGAATCCCCCAGAATCTGCTGTTATCACTATCCAGGCTGCCATCAGAGGGTTGCTGGCTCAGAGAGATTTAATGCAGATTAAGAATTTAGTGAAATTGCAAGCTGCTGTTCGTGGGCACTTGGTCCGGAGCCATGCTGTAGGAACCCTTCGCTGTGTTCAAGCCATTGCTAAAATGCAGCTTCTCGTTCGAGCTCGTCGGGCTCAGCAATCACAGGAAAATCAAAGCCACATGAGCAAGTCAAATGTGATGGATGCATCCATTGAGAAGCTGCTTAGCAGTAGGTTTGCTCGCCAGCTATTGGAATCAACACCAAAAAATAAACCTATACATGTCAAGTGTGATCCTTCTAAAGCTGATTCTGCATGGAAATGGTTGGAGAGGTGGATGTCTATGTCTTCAAAGTATACTTCAGATGACAAAAAAACAAGTTCCCTGACAGAGGAATCAGAAGTTTATCCACAGACAGCTGACACAAAGCCCAGTGTGGAGGATTCAATTCTACCTTCTAGGGATGAAAAGAAGCCAATTACTCATGATGCTAATAACTTCAGCTTTCAAGCAATCCGCTCTCCATCACCTTCTAAAAAGGCAGTTGAATTTGGTGCTAAAGTAGCCTCAGCAGAAATCGGTTCCTTTAAAGATGAAAAATCAGCATCAGATGTAAGTGCCCGACCAGAGGTTAAATCCCTTCCTCAGAAGCCTGAAATTGATGGTGAGCCGCGCAAACGATCAATGAAAAGATATGCATCAGACCAACTAGAAGCTGAACGAAATAAATCTGGACATGGATCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTTCAATGATAAATTCAGGTAGGACAAGCAGTTTTTCTGATCAAACTGCAGCAGTTGAATCAGAAGCAGACACCTCTTCTGTCAACATGGATATGGCATATAGATCAAAAGAGTTATCTGAGAATTCTGGTCCCTTTTTTTCTAAGCTTGGTGGTTCTCAATGTGGTACTAAACTATCTATTTCTTCCACTCTTGATACACCCAATGTATCCGAGGTTGGTCCTATTGAAGATGACCAAGATGCCAAAGATTTAGAAGGGGTTGGAAATCTTGACAAGAAAACAAACCTTGATGTTGATACCGATATTCCAGGTGCTATTCCATCTTCTCACTTAGCCACTGCTGTTATGGATCAGACAGAAACTGTTGACGAAATCAATGGCATTATGGTTCACTCATCAGTTGCAGTGGACTCTGAAGAGCCTGTTAGCAAGACTGAGAAAAATGCATCTGATGTACAGAGAGATCAAAATGAGGATCCTCTGCAAGGTTTCAGATCATCTCGAGAAGCATCACCTAAAACACACACAAAGGTCCCTGAATCACAAGAAACACCTTCGAGTCAGTTATCTATGAAACCCAAAGACGCCAAAGACAAGTCTAGATCCAACAGTAAACTTGGGACCCCACCAGTGGTTAACAAATCACCTGTAAATGGAAATCATGATTCGAGCTCTAGAGGTCAGCCGAGTGGGAAACGACGCAATTCATTTGGCTCAGTTAAAGCTGATCACATTGATCAAGAACCTACAGGTAACACAAATAACAATAGTCCTCTTCCCCGTTTCATGCAAGCAACAGAATCAGCTAAGGCCAAAACCAGTGCAAATAACACACCAAGGTCAAGTCCAGATGTGCATGAACGAGATGTTCAAGTTACGAAGAGACACTCGTTACCAGGTGCCACCGGTAGGCAGGTTTCTCCACGCATCCAACAATCGATGTCTCAACCACAGCAGAACCCGAAGGGATATTGTGTACAGCCTCAGCCTACACAAGAGAGAAAATGGGTGAGGTGA 2205 0.429 MGRPASCFKLIICGGDAAEKDDYQVAQIKDSNDKRGWSFRKKSVTAKQRVLSNTVTADSSSANKESSQCNSFNFEPNVVDKVYTTNNSDKKPNLSSIESSETNVIEAESKKDVNPPESAVITIQAAIRGLLAQRDLMQIKNLVKLQAAVRGHLVRSHAVGTLRCVQAIAKMQLLVRARRAQQSQENQSHMSKSNVMDASIEKLLSSRFARQLLESTPKNKPIHVKCDPSKADSAWKWLERWMSMSSKYTSDDKKTSSLTEESEVYPQTADTKPSVEDSILPSRDEKKPITHDANNFSFQAIRSPSPSKKAVEFGAKVASAEIGSFKDEKSASDVSARPEVKSLPQKPEIDGEPRKRSMKRYASDQLEAERNKSGHGSRKVSNPAFIAAQSKFEELSSMINSGRTSSFSDQTAAVESEADTSSVNMDMAYRSKELSENSGPFFSKLGGSQCGTKLSISSTLDTPNVSEVGPIEDDQDAKDLEGVGNLDKKTNLDVDTDIPGAIPSSHLATAVMDQTETVDEINGIMVHSSVAVDSEEPVSKTEKNASDVQRDQNEDPLQGFRSSREASPKTHTKVPESQETPSSQLSMKPKDAKDKSRSNSKLGTPPVVNKSPVNGNHDSSSRGQPSGKRRNSFGSVKADHIDQEPTGNTNNNSPLPRFMQATESAKAKTSANNTPRSSPDVHERDVQVTKRHSLPGATGRQVSPRIQQSMSQPQQNPKGYCVQPQPTQERKWVR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00133 734 MobiDBLite consensus disorder prediction 642 677 - -
Adu08g00133 734 SMART iq_5 138 159 IPR000048 GO:0005515
Adu08g00133 734 SMART iq_5 115 137 IPR000048 GO:0005515
Adu08g00133 734 ProSiteProfiles IQ motif profile. 138 167 IPR000048 GO:0005515
Adu08g00133 734 MobiDBLite consensus disorder prediction 457 497 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 325 382 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 260 275 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 573 587 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 343 376 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 599 631 - -
Adu08g00133 734 Gene3D - 117 157 - -
Adu08g00133 734 PANTHER PROTEIN IQ-DOMAIN 32 1 719 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 471 494 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 694 723 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 401 420 - -
Adu08g00133 734 Pfam IQ calmodulin-binding motif 118 135 IPR000048 GO:0005515
Adu08g00133 734 Pfam IQ calmodulin-binding motif 143 157 IPR000048 GO:0005515
Adu08g00133 734 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Adu08g00133 734 MobiDBLite consensus disorder prediction 528 734 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 536 550 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 249 290 - -
Adu08g00133 734 MobiDBLite consensus disorder prediction 551 565 - -
Adu08g00133 734 Pfam Protein of unknown function (DUF4005) 648 711 IPR025064 -
Adu08g00133 734 PANTHER IQ-DOMAIN 5-RELATED 1 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00133 Adu-Chr8 1952661 1956237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00133 98 734 IQD Protein Family AT1G19870 37.906 1.09e-97 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00133 - - adu:107460052 1434.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00133 08 1952661 1956237 Adu08g00133 08 1952661 1956237 ECH