Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00085 ATGACCACAAGGAGTCCTCGCTTCCTGCTTCGAAGCCTTGACCATATAGTATCCTTGTACGAATTGGTAAGGAGGTTCTGTCCCTCTGATCTTAAGGCCATTGCTTATATAACTGCATGGCCATCATCCATTGCTGATGTTCGTCTGGCTCAAAATGTGAAATTGCTGCTTGATGAAGGGTTGACCAATGCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTGTGCTGTCCTCTGCTGATTTGAAGAAAACAGTTGAGGAAGTGAAGCAATTGGGGTTTGATCCTTCACACTCTTATTTCAGTGTGGTGTTGCTGACCAAAAGGGCCATAACTAAGTCCAAATGGGAGGCTAAAGTTGATGTCCTTAAGAAATGGGGCTGGTCCGAACAAGATTTTTCGGAGGCCTTTAGGAGGCACCCCAATTTTATGCTACGTTCCGAGGACAAACTCAATGCAGTGATGAGCTTTTGGATCAGTAATCTCGGCTGGGATTCTTCGGCGCTTCGCATTAGACCGATGCTTTTTGGATGCAGTTTGGAGAAGAGGCTTATTCCTAGAGCTAAGGTTGTCAAATATCTTCTCTCCAATGGTTTGATGAAGAAGAATGCTAGCATAATCACACCATTTTCTTTGACTGAGGAGCTGTTCCTCAAGAAGTGTGTCACATGTTTTGAGGAGAAAGATCGGTCTCGCCTATTAACACTATATCAAGGAGGATGTTAG 726 0.4421 MTTRSPRFLLRSLDHIVSLYELVRRFCPSDLKAIAYITAWPSSIADVRLAQNVKLLLDEGLTNANIHHLLRTRPSVLSSADLKKTVEEVKQLGFDPSHSYFSVVLLTKRAITKSKWEAKVDVLKKWGWSEQDFSEAFRRHPNFMLRSEDKLNAVMSFWISNLGWDSSALRIRPMLFGCSLEKRLIPRAKVVKYLLSNGLMKKNASIITPFSLTEELFLKKCVTCFEEKDRSRLLTLYQGGC 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00085 241 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 2 239 - -
Adu08g00085 241 Pfam mTERF 46 217 IPR003690 GO:0003690|GO:0006355
Adu08g00085 241 Gene3D Transcription termination factor 3, mitochondrial 41 228 IPR038538 -
Adu08g00085 241 PANTHER CGI-12 PROTEIN-RELATED 2 239 IPR003690 GO:0003690|GO:0006355
Adu08g00085 241 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Adu08g00085 241 SMART mt_12 67 95 IPR003690 GO:0003690|GO:0006355
Adu08g00085 241 SMART mt_12 166 200 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00085 Adu-Chr8 1278723 1279448 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu08g00085 mTERF 1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00085 K15032 - gmx:102666739 225.328