Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu08g00085 | ATGACCACAAGGAGTCCTCGCTTCCTGCTTCGAAGCCTTGACCATATAGTATCCTTGTACGAATTGGTAAGGAGGTTCTGTCCCTCTGATCTTAAGGCCATTGCTTATATAACTGCATGGCCATCATCCATTGCTGATGTTCGTCTGGCTCAAAATGTGAAATTGCTGCTTGATGAAGGGTTGACCAATGCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTGTGCTGTCCTCTGCTGATTTGAAGAAAACAGTTGAGGAAGTGAAGCAATTGGGGTTTGATCCTTCACACTCTTATTTCAGTGTGGTGTTGCTGACCAAAAGGGCCATAACTAAGTCCAAATGGGAGGCTAAAGTTGATGTCCTTAAGAAATGGGGCTGGTCCGAACAAGATTTTTCGGAGGCCTTTAGGAGGCACCCCAATTTTATGCTACGTTCCGAGGACAAACTCAATGCAGTGATGAGCTTTTGGATCAGTAATCTCGGCTGGGATTCTTCGGCGCTTCGCATTAGACCGATGCTTTTTGGATGCAGTTTGGAGAAGAGGCTTATTCCTAGAGCTAAGGTTGTCAAATATCTTCTCTCCAATGGTTTGATGAAGAAGAATGCTAGCATAATCACACCATTTTCTTTGACTGAGGAGCTGTTCCTCAAGAAGTGTGTCACATGTTTTGAGGAGAAAGATCGGTCTCGCCTATTAACACTATATCAAGGAGGATGTTAG | 726 | 0.4421 | MTTRSPRFLLRSLDHIVSLYELVRRFCPSDLKAIAYITAWPSSIADVRLAQNVKLLLDEGLTNANIHHLLRTRPSVLSSADLKKTVEEVKQLGFDPSHSYFSVVLLTKRAITKSKWEAKVDVLKKWGWSEQDFSEAFRRHPNFMLRSEDKLNAVMSFWISNLGWDSSALRIRPMLFGCSLEKRLIPRAKVVKYLLSNGLMKKNASIITPFSLTEELFLKKCVTCFEEKDRSRLLTLYQGGC | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu08g00085 | 241 | PANTHER | TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN | 2 | 239 | - | - | |
Adu08g00085 | 241 | Pfam | mTERF | 46 | 217 | IPR003690 | GO:0003690|GO:0006355 | |
Adu08g00085 | 241 | Gene3D | Transcription termination factor 3, mitochondrial | 41 | 228 | IPR038538 | - | |
Adu08g00085 | 241 | PANTHER | CGI-12 PROTEIN-RELATED | 2 | 239 | IPR003690 | GO:0003690|GO:0006355 | |
Adu08g00085 | 241 | SMART | mt_12 | 134 | 165 | IPR003690 | GO:0003690|GO:0006355 | |
Adu08g00085 | 241 | SMART | mt_12 | 67 | 95 | IPR003690 | GO:0003690|GO:0006355 | |
Adu08g00085 | 241 | SMART | mt_12 | 166 | 200 | IPR003690 | GO:0003690|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu08g00085 | Adu-Chr8 | 1278723 | 1279448 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Adu08g00085 | mTERF | 1e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu08g00085 | K15032 | - | gmx:102666739 | 225.328 |