Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00083 ATGCTATTGATTGTGACGGATGTTGCAGCTCGTGGCATTGATATTCCATTGCTTGATAATGTTATCAATTGGGACTTCCCTCCAAAGCCTAAGATATTTGTTCAATGTGTTGGAAGGGTTGCAAGGGTTGGCCGTACTGGCATTGCTTATTCCTTCATGACATCGGAGGATATGGCTTACCTATTGGATCTTTATTTGTTTCTGTCAAACCAATACAAGCTGCTCCCACCGAAGAAGAGGTCTTGCAGAATATGA 255 0.4235 MLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVQCVGRVARVGRTGIAYSFMTSEDMAYLLDLYLFLSNQYKLLPPKKRSCRI 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00083 84 Pfam Helicase conserved C-terminal domain 2 44 IPR001650 -
Adu08g00083 84 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 78 IPR027417 -
Adu08g00083 84 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 1 73 - -
Adu08g00083 84 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 83 IPR001650 -
Adu08g00083 84 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 29 1 73 - -
Adu08g00083 84 Gene3D - 1 81 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00083 Adu-Chr8 1267998 1268252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00083 2 76 Eukaryotic Initiation Factors Gene Family AT1G72730 42.667 2.45e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00083 K14808 - pop:7491254 127.872