Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00077 ATGTCAAACTCCATGACCAATCAAAACCAATTTGAGGGGCAAGAGTTAGATGCTGCTTATGGTTCTTGTTTGAGAAACAACCCTGCATTCACTACTGAGTCCATAGGAGGAGTGTTTCCCATTATGGAACCTCACCATCATGCACTAGCTTCAGGCTCTGAGATGAGTCACACAAGGCATTTGATGGATCTTCTTGGAGCAGCTGCTAATGAGAGCAATCATCATCATCATAATCATCACCAACGACAACCTCAAGGGCTCTCTCTTTCCTTAGGGTCTCACATGATTGTTCCTTCTCATGATGAATACAGTAGGCATAATAGTAGATCCTTCGTTAATGGTTTCATGAACCCCAATAATTACTTCATCCCTGCCCAAGATTCAAGGGCAGTGGAGAATAATCTAACTAGTGACTACTACTTCAACAGTGCCACCACCACCACTACTTTTGCTTCATCTTCTGCCTCTTTTGGAAGTGAATCTTTTGCTGCTCTCATTGGGAACTCTAGGTACCTCAAACCAGTACAGTCCCTTCTTGAAGATCTTGTTGATGTTGGTGGAAACGTGGTTGATAGAATCAATGACAAGTATGTGGAGAAGTTGTTCCATGGTGGCAGGAACAGTTCCCGAACACTCTCCTCACAGTTCAGGAACAACATAAACACTGGTGTCTTGTCAGCTGAAAAACAAGAACATCAAATCAAGATTGCAAAATTGATTTCTTTGTTGGACGAGGTAGAAGGGAGGTATGAGAAATACTACCATCAAATGGAACAAGTGGTGGCATCGTTTGAGATGATAGCAGGTGAAGGAGCAGCAAAATGTTACACTGCATTGGCACTACAAGCCATGGCTAGGCACTTCTGCAACCTCAGAGATGCAATAATGTCACAGATAAATTTGGAGAAAAAGAAACTGTTGCAAGATTTGCCTAAACAACTCAACAATGGGTTATCTCAACTAAGCCTATTTGATAGAGACACAAGTAGACAAAGCAGAATGTCTTCTCTCCAACAACTTGGGATGATCCAAAGTCAACGCAGCCAACAAGTTTGGAGACCCATCAGAGGCTTACCTGAAACCTCTGTTGCAATTCTACGTTCTTGGCTCTTTGAGCACTTTCTCCACCCTTATCCTAATGATTCTGAGAAATTAATGTTAGCGTCCCAGACAGGTTTAACTAAAAACCAAGTGTCGAATTGGTTCATAAATGCAAGGGTACGGCTATGGAAACCAATGATAGAAGAAATGTACGAACAAGAGTTTGGAGACTCTTCAGAAGACTCCAACCCACAACCTGATTTCACCACCGATGATGCTACTCACTGCCACCACCACGATTCAAATTAA 1350 0.4237 MSNSMTNQNQFEGQELDAAYGSCLRNNPAFTTESIGGVFPIMEPHHHALASGSEMSHTRHLMDLLGAAANESNHHHHNHHQRQPQGLSLSLGSHMIVPSHDEYSRHNSRSFVNGFMNPNNYFIPAQDSRAVENNLTSDYYFNSATTTTTFASSSASFGSESFAALIGNSRYLKPVQSLLEDLVDVGGNVVDRINDKYVEKLFHGGRNSSRTLSSQFRNNINTGVLSAEKQEHQIKIAKLISLLDEVEGRYEKYYHQMEQVVASFEMIAGEGAAKCYTALALQAMARHFCNLRDAIMSQINLEKKKLLQDLPKQLNNGLSQLSLFDRDTSRQSRMSSLQQLGMIQSQRSQQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYEQEFGDSSEDSNPQPDFTTDDATHCHHHDSN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00077 449 ProSiteProfiles 'Homeobox' domain profile. 371 412 IPR001356 GO:0003677
Adu08g00077 449 SMART prehox3 160 297 IPR006563 -
Adu08g00077 449 SMART HOX_1 352 416 IPR001356 GO:0003677
Adu08g00077 449 Pfam Homeobox KN domain 369 408 IPR008422 GO:0003677|GO:0006355
Adu08g00077 449 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 11 47 430 - -
Adu08g00077 449 Gene3D - 346 427 - -
Adu08g00077 449 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 47 430 - -
Adu08g00077 449 SUPERFAMILY Homeodomain-like 358 421 IPR009057 -
Adu08g00077 449 Coils Coil 229 249 - -
Adu08g00077 449 Pfam Associated with HOX 166 296 IPR006563 -
Adu08g00077 449 MobiDBLite consensus disorder prediction 421 449 - -
Adu08g00077 449 CDD homeodomain 352 413 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00077 Adu-Chr8 1136147 1138237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00077 162 431 Homeobox Transcription Factor Family AT2G16400 49.632 2.13e-79 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Adu08g00077 POX 5.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00077 - - gmx:100807944 540.806