Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00071 ATGGAATCTCCAAATCTCCATCAACATCCTTCTTCATCTTCCTCATCATCATCATATGGATCCACCACCCACCATTCTTGGACTCCAAATATCACTTTCCACATCCAAGAAGATAACAATAATAATATTAATATTGGGATCCCTCTCATCCAAGATCATCACCATCAACCAAGCTGCTTAAGCTTAAACACCACCAACCACATCACTATTAATCATAATATGCTAAACTCTCATACACCTCCTCCTCCTTCTTCAACCGTCGAATTCTCAACACACGATGATGACAAGCTCTTGCTCAAGACGTTTTTCTCTGCACAAGATTTCTACTCCAATAACAATACTACTTTCTGTGAAGTACCTTCTAGTAGTAGACGAAACTTTAGTCACATTTATCCCACCATAAATATCTCTAATAATATCAACAACCACTCATCACCATCACCGTCATCTTCTAGTAATAATATGACCTCGCACTCCTTGGATCTACCAGCTTTCATGACAACTACCACTCATGGTGGCGGTGCTGCTGCACATCAACAAGTAGATCTTGGTCTTGCTACATTTTCCGACAACCACCTTTCTTTTCATCTTGATCATCATCATAGCCACCACCACCGCCCTACTCACGCCTCCTCGCCGCCCTGTAGTAACTCTACTACTTCCACTACTGCTAATAATAACAGTCATCCATCACAATACTTCGTCTCCAATGGCACTGTGGACACAAAGAGACCCTGCACTTCGATAATGGACACAAAGGCTTCTCAATCTCTAACAGCATCCAAGAAATCACGATCCGAATCGCGCCCCTCATGCCCTCCCTTTAAGGTTAGGAAAGAGAAATTAGGAGATAGGATTGCGGCTCTTCAACAGTTGGTGGCTCCTTTTGGTAAGACAGACACAGCATCCGTACTTATGGAAGCAATCGGATACATAAAATTCCTTCAAAGCCAAGTAGAGACACTGAGCGTTCCATACATGAAGCCAACACAGAACCAAACCAACACCAGAATGATGCAAGGGGTTTCAGCGATAGGCGGCGGAAATGGGGAACCAAAGCAAGACCTTCGAAGTCGAGGCCTTTGTCTGGTGCCATTGTCGTGCATGTCTTACATAGCAGGTGATGCCAGCAATGACACGTGGCAACAATCAAACTTTGGAGGAGCAACTTAG 1173 0.4382 MESPNLHQHPSSSSSSSSYGSTTHHSWTPNITFHIQEDNNNNINIGIPLIQDHHHQPSCLSLNTTNHITINHNMLNSHTPPPPSSTVEFSTHDDDKLLLKTFFSAQDFYSNNNTTFCEVPSSSRRNFSHIYPTINISNNINNHSSPSPSSSSNNMTSHSLDLPAFMTTTTHGGGAAAHQQVDLGLATFSDNHLSFHLDHHHSHHHRPTHASSPPCSNSTTSTTANNNSHPSQYFVSNGTVDTKRPCTSIMDTKASQSLTASKKSRSESRPSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQSQVETLSVPYMKPTQNQTNTRMMQGVSAIGGGNGEPKQDLRSRGLCLVPLSCMSYIAGDASNDTWQQSNFGGAT 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00071 390 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 276 329 IPR036638 GO:0046983
Adu08g00071 390 MobiDBLite consensus disorder prediction 209 268 - -
Adu08g00071 390 MobiDBLite consensus disorder prediction 198 276 - -
Adu08g00071 390 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 266 315 IPR011598 GO:0046983
Adu08g00071 390 CDD bHLH_AtbHLH_like 273 323 IPR045239 -
Adu08g00071 390 PANTHER OS01G0105700 PROTEIN 47 375 - -
Adu08g00071 390 MobiDBLite consensus disorder prediction 137 159 - -
Adu08g00071 390 MobiDBLite consensus disorder prediction 1 23 - -
Adu08g00071 390 Gene3D - 276 340 IPR036638 GO:0046983
Adu08g00071 390 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 47 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00071 Adu-Chr8 952803 956377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00071 73 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 43.269 1.42e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00071 - - aip:107610095 637.106