Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00050 ATGAAGTACGAGTATGAGAATTATGACCCTTCATTCCCGGACCAACCGGTGGTTGATGAATACCTGCCGGTATGGTCTAGGCTACCGGCATTTGGGTCCAAGCCAGCATTCATTTGGGCTCATGATAACAACAATAAGACCATCCTAACCTACTCACAACTCAATGCCTCAGTTGACCACATCTCCTCCCACCTTCTCACTACTCCCACTCTTCAAAGAGGTGACACTCTCCTTCTTCTCTCTTCTCCAGGTCTTCACTTTGTTGAACTCATCTTCGCTTCCCAAAGGGCTGGAATTTTATCTGTCCCTATAATCCCTCCTCACCCTTCTTTCGCTAATGAAAATTATCACCACCTTCTTAGAGTTATCTCGCAGACTAAACCCAAAGCTGCAGTTGCTCATTCTTCTTACGTTTCATGTATCCAACGCTATCTCTCTGATCACAACAACATTAATCATAATCCTAATCTTGTTCGTGCGTTACAAACCATGAAATGGATTTCCATTGAGGACATCAAGCATGGTGCTAATAATAATAAAAATAATGATAAATTTGGTGGATCCCTAACATACAATGGTTGCAGGGAGAATGATGTGTATCTTGTTCAGTACACTTCTGGCGCCACCGGGATTCCGAAACCGGTTCTTGTAACGGCGGGTTCAGCCGCACATAACGTCAGAGCTGCTAGGAAAGTCTATGATCTTCACCCAAACAGTGTTATTGTTTCGTGGCTTCCTCAGTACCATGACGCTGGCCTCATGTTTTTGTTGTTAACCATTGTTTCTGGTGCTACTTGTGTTCTTACTTCGCCAACCTCGTTCATCAAACGTCCCAGGTTGTGGCTTGAATTGATCTCTGAATTCAAGGCCACGTGTACTCCGGTACCTTCTTTCACGTTGCCACTGGTTCTCAAACGTGGAGGAGTTGATAAAGGAGTATCTCCCATTAATCTTTCCCATTTGAGGAACCTTATACTCATCAACGAACCTATTTACAGAGACTGTGTCGAAGAGTTTGTTGGAGTCTTCGGTCCCTTTGGGTTAAGCTCTTGTGCCGTTTCTCCTTCTTATGGTTTAGCTGAAAACTGCACCTTTCTTTCCAGTGCATGGAGGAGTGAAAGTGACGCGTATTCTTCTAGTAGCTTCCACGATTTTCCAACTCACAACAAGCTTTTACCGGTTGCGAGACTATGTAGGAAGGAGGAACAAGAAGACATGGAAATCGTGGTGGTTAATGAAGAGACTCATGAGCCAGTTGAGGATGGTGTTGAAGGTGAGATTTGGGTTTCATCACCAAGCAATGCTTCTGGATACTTGGGACACCCTTCTTTGACGAGAGAAGTGTTCCATGGAAGACTGAGGAACATGGTTGGAAGATGCTTTCTTAGAACACGTGACACAGGGATTGTTAAAGGAGAGGGGAGATACCTCTTTGTTACTGGAAGGTGTGAAGATATAATCAAGCTCCAAAATGGTGAAAAGATTCATCCTCATTACATTGAATCTGCAGCGTATAACAGTTGCACAAAGTTTTTGAGAGGTGGTTGTGTTGCGGCGTTTAAAGTTTCTGAAACAGTTGTTGCAGTGGTGGCGGAGTTACAGAGAACTGAGAAAGAGATAATGGTGGATAATGAGGTGTTGGGTAGCGTTTGTAATGGGATCAAAGAAAGTGTTTTGAAGAAGGAGAATGTTCAAGTTGGGTGGGTTGTTTTGGTTAAGAGTGAAAGTGTTCCAAAAACCACTTCTGGGAAATTGCAAAGATGGCTTGCTAAGGAGAAGATTCTTGGTGGGAAAATGAAGGTTGTGATGGAGATGAAATTTGGTGATGATGATGAGGTGGGACGAAGGTCAACTTCGACGTCCGTTTCTGGAAGTGGATTCATTGAGGAAGGTTTAGGAGAAGTATACAGTCGTTGGTGGAGGCGACCTCACCCGACAGTCTTGGCTCAAGGTTGCATTCAAGCATTGGCTAGTTTAGGTCCAGGTAGCCTGACAAATGATGTGAATATATGTCCCAATGATGGTTGGAGCACCGATTCTGGTGACGAAGATGATTCGAACGGGTCGGAAGATCCGTATACTGACGAAGGTGATAATGGCCCTACTGACAGCGAATACCAAGACTGCGATGGTGGTGGATGCGATGTAGAGTTTACTGGGGTTGAAGATGCTTACGCAAGCTATATGGCATATACGAAGGGTATTGGTTTTGCCATACGAAAGGGAGATTCTGTTAAAGACGAGGAGAAAAATATTGTCAGAAAATTTTTCTACTGCAATCGGCAAGGGTTGCGGGAAAAGAAGCACTATGAGAGGGTTGACAGAAAAGGCCCCATAAACTGGAGACGAGAGCAAATTGAAATGCCAAACATGCAATCCAGGATCATTGAGGGAGATGTAGCCGCAGCAAGAAGCTACTTGAAGGGTAAGGCTGAGTTGGATCCTATGGCAGTTGTGCAGTATACGTATTGTGCTGAGAAGCACAGCAATAAGCTACTTGAAGGGCAAGGCTGA 2514 0.4439 MKYEYENYDPSFPDQPVVDEYLPVWSRLPAFGSKPAFIWAHDNNNKTILTYSQLNASVDHISSHLLTTPTLQRGDTLLLLSSPGLHFVELIFASQRAGILSVPIIPPHPSFANENYHHLLRVISQTKPKAAVAHSSYVSCIQRYLSDHNNINHNPNLVRALQTMKWISIEDIKHGANNNKNNDKFGGSLTYNGCRENDVYLVQYTSGATGIPKPVLVTAGSAAHNVRAARKVYDLHPNSVIVSWLPQYHDAGLMFLLLTIVSGATCVLTSPTSFIKRPRLWLELISEFKATCTPVPSFTLPLVLKRGGVDKGVSPINLSHLRNLILINEPIYRDCVEEFVGVFGPFGLSSCAVSPSYGLAENCTFLSSAWRSESDAYSSSSFHDFPTHNKLLPVARLCRKEEQEDMEIVVVNEETHEPVEDGVEGEIWVSSPSNASGYLGHPSLTREVFHGRLRNMVGRCFLRTRDTGIVKGEGRYLFVTGRCEDIIKLQNGEKIHPHYIESAAYNSCTKFLRGGCVAAFKVSETVVAVVAELQRTEKEIMVDNEVLGSVCNGIKESVLKKENVQVGWVVLVKSESVPKTTSGKLQRWLAKEKILGGKMKVVMEMKFGDDDEVGRRSTSTSVSGSGFIEEGLGEVYSRWWRRPHPTVLAQGCIQALASLGPGSLTNDVNICPNDGWSTDSGDEDDSNGSEDPYTDEGDNGPTDSEYQDCDGGGCDVEFTGVEDAYASYMAYTKGIGFAIRKGDSVKDEEKNIVRKFFYCNRQGLREKKHYERVDRKGPINWRREQIEMPNMQSRIIEGDVAAARSYLKGKAELDPMAVVQYTYCAEKHSNKLLEGQG 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00050 837 MobiDBLite consensus disorder prediction 678 703 - -
Adu08g00050 837 MobiDBLite consensus disorder prediction 670 711 - -
Adu08g00050 837 PANTHER 10A19I.5 6 615 - -
Adu08g00050 837 Pfam AMP-binding enzyme 32 490 IPR000873 -
Adu08g00050 837 SUPERFAMILY Acetyl-CoA synthetase-like 27 596 - -
Adu08g00050 837 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 6 615 - -
Adu08g00050 837 Gene3D - 6 483 IPR042099 -
Adu08g00050 837 Gene3D - 485 615 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00050 Adu-Chr8 702773 706846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00050 194 587 Monolignol Biosynthesis Gene Families AT4G19010 25.310 5.83e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu08g00050 AMP-binding 2.6e-70 CL0378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00050 - - gmx:102662250 882.478