LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g00008	ATGGATATAGGTTGTAGCTTGCCGCCCTCAAAAATGGTGGTGGATCGTTTCGATTCTTGCATTGCTTTTGGTGGGAAGGGTTTTGGTTGTGCTTTTCTCGGGAACTCAAGAACTATCCTGAAAGCGCGGTTTAGTGGCATGAACAAGATTGGTATTGCTGCTGCATGTAGTAGTAGTAGTAGTTGGAGGAGTAATAATTCAAGATTGGCTTGTGTAGGAGAGTTCAACTTTTCAAATGTGAAGAGAATAGGGAAACTTTGTGGCAACAGTTCTAATTTTCGCGTTGTGGGAGGTAGGGGATTTTTGTCTAGGTGCCAGGGTGATGATGATTCTTTAGCATATATTAATGGCAATGGCCGGAATATTGATAATGCTGGAGGGGGTCCGAATAAGGTGGCTTCTGATTTGGGTTCCATTTCAGGAGCTGCATCGAGTGAACCCTTGGAAGTCGAAAGAACAATTGGGGGTGAAATAAAGCAAGAGGTACAGACAGTGGATGAATTGAAAGAACTGTTGCAAAAGGCCTTGAAGGAACTCGAAGTTGCTAGGCATAATAGTGCCATGTATGAGGAGAGGGTCAAGAAGATATCGGAGAGTGCGATTTCCTTTCAGGATGAAGCATCAAGAGCATGGAATGATGTTAATTCTACTCTTGATATCATCCAGGAAATTGTGGGTGAAGAATTTGTTGCCAAGGAAGCTGTTCAGAAAGCGACTATGGCTCTTTCTTTTGCCGAGGCTAGGCTTCAAGTAGCCATGGAGTCTTTGGAGGTTGTAAAAGGAACTTATGATCCTCGGTCACAAGGTGCCAAAGAGAGTAATGGCGATGAAGATATATTGGAAGAGGAGCAATTGCTTGTGGTTGCTCAAGAAGATATCAAGGAGTGTCAGTCAAATTTAGCGAATTGCGAGACAGAGCTAAGGTGCTTGCAAAAAAGAAAGGAGGATTTGCAGAATGAAGTGAACAAGTTGCATGAAATTGCGGAAAAGGCCCAGATGAATGCAGTAAAAGCCGAGGAGGACGTCACAAACATAATGCTTTTAGCTGAGCAAGCTGTTGCTGATGAACTTAAGGCTGCACAAGTCGTAAATGATGCAGAGATTGCATTATCAAAAGCAGATAAGTCTGCCTCTAGCGTTATTGCTGACTCTGGTATCACTCTACAAGAACAAGAGGTTTTGGACGATCCTAAGGAAGAGGTGGTTCAAAATGTTTCTGGCGATGACACTGTTGATACAGACACAGATTCCCAAATTGACAATGAAACTTTGCTTGGCAAGCAATCATCAGACAAGTTTTCTGATAAAACCAGCCAAGTTATTGAAGATACGGCACAGTCTGATTATCTGAGTGATCATGAAAATGGACAGTTAGTCTTAGACCCATCTAAAGAAGCTGAAGTTGAAGTAGAGAAAATAATGAATTCAGTTCAAATGAAAAAACAGGAAACACAGAAAGATATAAGAGACAATCCACCACTTGTTCCCAAGGCATTGTTGAATAAGTCTTCCAGATTTTTTCCTGCATCATTCTTCTCTTTTACTATCGAAGGTGATGATTATACACCAGAATCATTTTTCCAAAGTTTCGTGGAGTCAGCACGGAAGCTGTTACCCAAGCTAGTTATTGGGATATTGTTACTTGGAGGGATTGCCTTCTATGCAAACAGAGCAGAGAGGAGTGCGCAATTACTTCAGCAACCAGAAGTAATTACAACCACTGCTGAAGAAGTTTCCACAAGTGCAAAACCTTTGGTTAGACAGCTTCAGAATCTCCCCACGAGGATCAAGAATATTATTGCATCATTACCTGATCAAGAGGTGGATGAGGAGGAAGCATCCCTTTTTGATATGCTTTGGTTATTACTTGCTAGTGTTATTTTTGTGCCAGTGTTTCAGAAAATCCCTGGAGGCAGTCCCGTTCTTGGTTACTTGGCTGCTGGTATCCTTATTGGGCCCTATGGTCTGTCCATCATTCGTCATGTTCATGGGACGAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTTGAGCTCTCTTTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCAGCTCAGGTTTTGGTGACTGCTGTTGTTGTTGGCCTAGTAGCTCATTATGTTTGTGGTCAAGCAGGTCCTGCTGCTATTGTCATTGGGAATGGCCTCGCATTATCATCAACCGCTGTTGTTCTGCAAGTATTACAGGAGAGAGGTGAGAGCACATCACGCCATGGACGAGCCACATTTTCTGTGTTACTTTTTCAGGACTTGGCGGTTGTGGTCTTGCTAATTCTCATACCTCTTATTTCACCTAATTCATCTAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCTCTTGGTCTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGTCATTATTGCAGGTGGACGATTGCTACTTCGACCAATATATAGGCAGATTGCAGAAAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACAAGTCTTCTCACAGCCAGGGCAGGGCTTTCCATGGCACTAGGAGCATTTTTGGCTGGTTTACTACTAGCAGAAACTGAATTTTCCTTACAAGTGGAATCTGACATTGCTCCATATCGTGGTCTTCTGTTAGGTCTGTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAAATTTAAAGTCATTATGGGGACGCTGGCGCTCTTACTATGTGGCAAGACACTGTTGATTACTGTGATTGGTAGAATTTTCGGTATTTCACTCATTAATGCCATAAGAGTTGGCCTCCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCCTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGATGTCCTCTCTGCTGTTTCTTCTTGTGGGAATCTCAATGGCCCTCACACCATGGCTAGCTGAAGGAGGACAGCTGATTGCTTCCCGTTTTGAGCTACATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGACGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCACAACTTCTTTCGGAGCGACTTATTCCTTTTGTTGCACTAGACGTCAGAAGTGATAGAGTGGCAATTGGGCGTGCCCTGGATCTCCCAGTGTACTTCGGAGATGCTGGTAGCCGAGAGGTCCTACATAAGGTCGGGGCTGAAAGGGCGAGCGCTGCTGCAGTAACTCTAGATTCTCCTGGTGCAAATTATAGAACAGTTTGGGCTTTAAGCAAGCACTTCCCGAAAGTGAAGACCTTCGTCCGTGCTCATGATGTTGATCATGGATTGAACTTAGAAAAGGCTGGAGCCACTGCTGTTGTCCCAGAGACCTTAGAACCAAGTCTTCAACTAGCAGCTGCAGTGCTAGCTCAGGCTAAACTTCCAACAACAGAGATTGCAGCAATCATAAATGAATTCAGATCACGCCATTTAGCCGAGCTCACCGAACTATGTGAAGCAAGTGGAAGTTCTCTTGGATATGGATTCAACAGAGCTATGACTATGAGCAAACCCAAATCTCAATCCTCAGATTTCTCAGATGATAACCAAGTCTCTGATGGAACAGTGGCAATATGA	3666	0.4304	MDIGCSLPPSKMVVDRFDSCIAFGGKGFGCAFLGNSRTILKARFSGMNKIGIAAACSSSSSWRSNNSRLACVGEFNFSNVKRIGKLCGNSSNFRVVGGRGFLSRCQGDDDSLAYINGNGRNIDNAGGGPNKVASDLGSISGAASSEPLEVERTIGGEIKQEVQTVDELKELLQKALKELEVARHNSAMYEERVKKISESAISFQDEASRAWNDVNSTLDIIQEIVGEEFVAKEAVQKATMALSFAEARLQVAMESLEVVKGTYDPRSQGAKESNGDEDILEEEQLLVVAQEDIKECQSNLANCETELRCLQKRKEDLQNEVNKLHEIAEKAQMNAVKAEEDVTNIMLLAEQAVADELKAAQVVNDAEIALSKADKSASSVIADSGITLQEQEVLDDPKEEVVQNVSGDDTVDTDTDSQIDNETLLGKQSSDKFSDKTSQVIEDTAQSDYLSDHENGQLVLDPSKEAEVEVEKIMNSVQMKKQETQKDIRDNPPLVPKALLNKSSRFFPASFFSFTIEGDDYTPESFFQSFVESARKLLPKLVIGILLLGGIAFYANRAERSAQLLQQPEVITTTAEEVSTSAKPLVRQLQNLPTRIKNIIASLPDQEVDEEEASLFDMLWLLLASVIFVPVFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSFERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITVIIAGGRLLLRPIYRQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSKFKVIMGTLALLLCGKTLLITVIGRIFGISLINAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLLVGISMALTPWLAEGGQLIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPKVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTTEIAAIINEFRSRHLAELTELCEASGSSLGYGFNRAMTMSKPKSQSSDFSDDNQVSDGTVAI	1221

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g00008	1221	MobiDBLite	consensus disorder prediction	406	432	-	-
	Adu08g00008	1221	Coils	Coil	463	483	-	-
	Adu08g00008	1221	Pfam	TrkA-N domain	1024	1137	IPR003148	GO:0006813
	Adu08g00008	1221	ProSiteProfiles	RCK N-terminal domain profile.	1023	1145	IPR003148	GO:0006813
	Adu08g00008	1221	PANTHER	K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED	1	1221	-	-
	Adu08g00008	1221	MobiDBLite	consensus disorder prediction	1199	1221	-	-
	Adu08g00008	1221	Coils	Coil	279	341	-	-
	Adu08g00008	1221	Pfam	Sodium/hydrogen exchanger family	620	991	IPR006153	GO:0006812\|GO:0015299\|GO:0016021\|GO:0055085
	Adu08g00008	1221	TIGRFAM	2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family	622	902	IPR004771	GO:0006812\|GO:0008324\|GO:0016021
	Adu08g00008	1221	Coils	Coil	158	192	-	-
	Adu08g00008	1221	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	1020	1161	IPR036291	-
	Adu08g00008	1221	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	1	1221	-	-
	Adu08g00008	1221	Gene3D	-	611	997	IPR038770	-
	Adu08g00008	1221	Gene3D	-	1019	1183	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g00008	Adu-Chr8	93898	102203	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu08g00008	100	1221	Inorganic Solute Cotransporters	AT4G00630	68.011	0.0	1370

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g00008	-		-	adu:107460050	2186.38