Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02604 ATGCGGCGTTCTTGGGCCCGGGAAGGAGATGCAGCGGCGCAGCGCTGGCAGGCAGAGTTCTTGGGCCTGGGAAGGAGATGCATGAAGACCCTCCCCTTTACCTTGAGTGAAGATCCTCCCTGCGACGTTGAAGGAGAAGGAAGTTTTGTTAGAAGTCTGAGAAAGGAACTATGTGACTGGGTATGGGTGGGTTCCGGGTTGGGCGGATACGGCTTGTGGAGATTTATCTGGGCAAGGTCACACGAACTAGATTCGTTGCTATCGGGCCGAGTTGCTGGTAGATGGCTCAGTTTGAGAACTAGGTGTTGCAGGGTTGAATCTGGGCTTGACTATTCTAAGCCCAAAGCACTTGCAGTTGCAGGCCTTCGTCTCTTGCTCCTATTATCATTTAGGTTTCTTAGTTCTGTTGAGATGGTCTGTACGTCAAATGGTGACAAGGAAGAGTGTTCAGAATCCGAACCCATCTTGAATCAGCATCTAAATTTGCAAGAATATGGAGGAGGAGGAGGAGAGTCTTCATTTTCCTGTGAAATCATTGCTGCTGCTAACGATGATTCACACCCTGTTCCTCTTGATGAGAGCTGTCATCTGGTAAATGCGGATCAGCCACAGTGCCGGATATGCCTTGATATAGGAGGAGAAGATTTGATCGCTCCTTGCCATTGCAAAGGCACCCAAAAGTATGTCCACAGATCATGTCTAGATAATTGGCGGTCTACAAAGGAGGGCTTTGCTTTTTCTCACTGTACAGAGTGTAGAGCTGTCTTCATATTACGTGCAAACGTCCCACCAGATCGGTGGTGGTTGAGATTAAAATTTCAGTTTCTTGTGGCCAGAGATCATGCATTCATTTTCATAATTGTTCAACTGGTTGTTGCTTTCTTGGGGGTGCTTGTGTATAAATTTTATGGAGATGAACTAAGGGAAATGTTTGGTTATGAAGAACATCCATATGGATTTTATACAATGGCTGTTTTAGCCATTGTTTTGGTGGGATTGCTCTATGGATTCTTCATAGCCATAATATGCGGCCAAAGAATCAATGAACGCCACTACCATGTTCTTGCAAAACAAGAATTGACAAAGGAATATGTGGTAGAAGATCGAGAACATGTGAAGAATGTGCCTGAACTTGATCCCAGCCATGTGACAGAGCTAAGGATGTTGGGCCTTTACTAA 1179 0.4555 MRRSWAREGDAAAQRWQAEFLGLGRRCMKTLPFTLSEDPPCDVEGEGSFVRSLRKELCDWVWVGSGLGGYGLWRFIWARSHELDSLLSGRVAGRWLSLRTRCCRVESGLDYSKPKALAVAGLRLLLLLSFRFLSSVEMVCTSNGDKEECSESEPILNQHLNLQEYGGGGGESSFSCEIIAAANDDSHPVPLDESCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02604 392 SUPERFAMILY RING/U-box 200 256 - -
Adu07g02604 392 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 140 391 - -
Adu07g02604 392 PANTHER OS02G0132300 PROTEIN 140 391 - -
Adu07g02604 392 SMART ringv_2 204 253 IPR011016 GO:0008270
Adu07g02604 392 Pfam RING-variant domain 205 252 IPR011016 GO:0008270
Adu07g02604 392 ProSiteProfiles Zinc finger RING-CH-type profile. 197 259 IPR011016 GO:0008270
Adu07g02604 392 CDD RING_CH-C4HC3_MARCH 205 253 - -
Adu07g02604 392 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 257 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02604 Adu-Chr7 79846455 79857773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02604 171 351 C3H Transcription Factor Family AT1G50440 67.016 6.62e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02604 - - gmx:100789593 472.626