Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02598 ATGCCAAAGAAATTACTGTGTAGATATGCAATTTCACACCAAACTGGCGACCCTAACGCCTCTTTCTTTCACCTTCTCTTTCTTCTTCATCACTTTCTTCCCCAATTGAGCCAAGAGAGTAGTTCTCTGCTACTCCTGATGGGTGCTCCTAAGCAGAAATGGACATCTGAAGAGGAAGCAGCTCTTAAAGCTGGAGTTGTCAAGCATGGGGTTGGTAAATGGCGTACAATACTCAAGGATCCAGAATTTAGTGGTGTTTTGTATCTGCGGTCCAATGTGGATCTCAAGGATAAATGGAGAAATCTGAGTGTGATGGCAAATGGATGGAGTTCTAGGGAAAAGTCTAGGTTGGCTATCAGAAGGGTGCATCAAGCCCCAAAACATGACGAGAACCCTTTTGCTGTCGCTCCTTTTACTCCAAGTGATGAAGATATTGTTGATGTTAAGCCTATTCAAGCTTCCAGAGATGTGGTGCCATTTTCTGGTCCAAAAAGGTCTATTGTAAGATTGGATAACCTTATAATGGAGGCAATAACTACCTTGAAGGAAACTGGTGGTTCTAATAAGACAACTATTGCAGCTTTCATAGAGTCACAAAATTTGGCTAATGTGGTTTTCTTGGCCCTGATATGTTAG 636 0.4214 MPKKLLCRYAISHQTGDPNASFFHLLFLLHHFLPQLSQESSSLLLLMGAPKQKWTSEEEAALKAGVVKHGVGKWRTILKDPEFSGVLYLRSNVDLKDKWRNLSVMANGWSSREKSRLAIRRVHQAPKHDENPFAVAPFTPSDEDIVDVKPIQASRDVVPFSGPKRSIVRLDNLIMEAITTLKETGGSNKTTIAAFIESQNLANVVFLALIC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02598 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 79 IPR017930 -
Adu07g02598 211 SMART sant 50 105 IPR001005 -
Adu07g02598 211 Pfam Myb-like DNA-binding domain 51 102 IPR001005 -
Adu07g02598 211 ProSiteProfiles Myb-like domain profile. 51 103 IPR001005 -
Adu07g02598 211 SUPERFAMILY Homeodomain-like 48 117 IPR009057 -
Adu07g02598 211 PANTHER SINGLE MYB HISTONE 4 47 203 IPR044597 GO:0003691
Adu07g02598 211 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 47 203 - -
Adu07g02598 211 CDD SANT_TRF 52 102 - -
Adu07g02598 211 Gene3D - 48 105 - -
Adu07g02598 211 SUPERFAMILY "Winged helix" DNA-binding domain 163 202 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02598 Adu-Chr7 79792724 79795684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02598 47 210 Single Myb Histone (SMH) Gene Family AT1G49950 65.244 1.37e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu07g02598 Myb_DNA-binding 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02598 K09422 - gmx:100780698 258.84