Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02591 ATGAATACGATGAAGAAAGGCGGTTGCCAGAAATCTTCAATTTCAGGGCAGCCTTACAGTTCGCTGTATTTCAATCCGCTGAATGAAAATGGGGATGAGGATGAGGTGAGACAGAAGCGCACCCGCACGCGTAGCTGCAGCGACTACGGCCTTCGCAGCTTAGCCTCCGGCTTTGAGGACGATAGCAACAAGGAAAACAACGCCGCCATCATCAATGGCTCTTCTATTTCTCTTTCTCTGCCCGCTCCTAAGATTAGGAAGCACTTCCCATCAAAATGTACATGCCTTATTCTGAAGGAGCCCACTCCACAAGGCCATGGCACTCTCTATTGTCTTTATACCTATGAAGGTCAGGGACGCCAGAATAGGAAATTAGCAGTGGCCCATCACAAGCGCCGGAATGGCAAATCTCACTTCACAGTAGCTCAGAATGTAAAAGGACTCTTATCCAATTCAGATGATACTTTCCTTGGGACCATGACAGCTAACCTCATCGGCTCAAAATACCATATCTGGGATCAGGGATATCGACCTAATTCCCGCAATACGCAACCGAAATTACCTCTTGCTGTAGTGACGTATATACCAACAGTAGCAACATGTACCGGAAGTCACAGAAGCATGAGAGCATATATCCCCAAGCATCAATCTCTGTCACTGAAGAATGTCACACAGTTACAACATATTAAAGGGTTGCCATTGGATTGGGAGGAGAAATGGGACACAGTGCATCAACTATTCTCAAAGGTTCCACTTTACAACAAGATTTCAAAGCAATTTGAGCTTGACTTTAGAGATAAAGGAAGGGCAGAACTTAGAATCCAAAGATCGGTGAAAAATTTCCAACTCACTTTAGAGGAGAATGGGAAGCAGACGATCCTGCAGCTAGGCAGGGTGGGAAAATCAAAATTCGTCATGGACTACAGATATCCACTGACAGGCTACCAAGCTTTTTGCATCTGTCTGGCTTCCATTGATACAAAGCTTTGCTGCACAGTGTAG 1002 0.4541 MNTMKKGGCQKSSISGQPYSSLYFNPLNENGDEDEVRQKRTRTRSCSDYGLRSLASGFEDDSNKENNAAIINGSSISLSLPAPKIRKHFPSKCTCLILKEPTPQGHGTLYCLYTYEGQGRQNRKLAVAHHKRRNGKSHFTVAQNVKGLLSNSDDTFLGTMTANLIGSKYHIWDQGYRPNSRNTQPKLPLAVVTYIPTVATCTGSHRSMRAYIPKHQSLSLKNVTQLQHIKGLPLDWEEKWDTVHQLFSKVPLYNKISKQFELDFRDKGRAELRIQRSVKNFQLTLEENGKQTILQLGRVGKSKFVMDYRYPLTGYQAFCICLASIDTKLCCTV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02591 333 SUPERFAMILY Tubby C-terminal domain-like 91 332 IPR025659 -
Adu07g02591 333 MobiDBLite consensus disorder prediction 1 41 - -
Adu07g02591 333 Gene3D Tubby Protein; Chain A 78 332 IPR025659 -
Adu07g02591 333 PANTHER TUBBY-RELATED 92 331 - -
Adu07g02591 333 PRINTS Tubby superfamily signature 310 332 IPR000007 -
Adu07g02591 333 PRINTS Tubby superfamily signature 156 180 IPR000007 -
Adu07g02591 333 PRINTS Tubby superfamily signature 289 308 IPR000007 -
Adu07g02591 333 PRINTS Tubby superfamily signature 246 263 IPR000007 -
Adu07g02591 333 MobiDBLite consensus disorder prediction 1 27 - -
Adu07g02591 333 PANTHER TUBBY-LIKE PROTEIN 8 92 331 - -
Adu07g02591 333 Pfam Tub family 92 327 IPR000007 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02591 Adu-Chr7 79736566 79738273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02591 92 226 TUB Transcription Factor Family AT1G16070 56.934 2.57e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Adu07g02591 Tub 7.4e-43 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02591 K19600 - gmx:100803500 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02591 07 79736566 79738273 Adu07g02591 07 79736566 79738273 ECH