Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02578 ATGACCACTGATTCTGAATTGGTTCATTCCTCCGCTTTGCACCACACACACATCTTTCTACTTTCTAGTTTCTACGGTCCACACCGCCTTGCTTCCTCTCCCATTTCAGTGTATTACTTTCCAGTTGACAGTTGCTGCATTTCTTTCTGCTTTTGCAACCAAAAGAAAGAGACAAAATACTCAGTTTCAGTGGAAAGGAAGGAGAAAAAAGTTGAGAGGATCAGTGTTAGTAAGAGAACATGGTTGGCAGGGGTGGTTCGGGGACTGGCTCTGGGTGTGGCTCTGCCTCTGGCTCTGCCTCTGGATGTTGATCAAGTTGTTGTGCCTGATACCAGAAGCTGGAAAAATCTATTTTCTTACATGGGGCCTGGCTTTCTTGTTTCCATTGCATACATAGACCCGGGAAACTTTGAGACAGATCTTCAGTCGGGGGCTCAACATAAATACGAGCTACTTTGGATCATATTGGTGGCATCCTGCGCTGCTCTATTAATTCAATCCATGGCAGCCAATCTTGGGGTCGTCACTGGAAAGCACTTAGCAGAGCATTGTAGAAATGAATATGCTTGGGCTACCAACTTTATTCTTTGGTTTATTGCTGAAATTGCCATAGTCGCCTGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTTTTCAGCATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGTACATTGATCCTCTTAGCTTTGCAGCAATATGGGGTAGTTAGAAAACTTGAATTCTTGATTGCATTTCTAGTATTTACAATTGCTGCATGCTTTTTTGCTGAGCTTGGATATGCAAAACCTGTTGCTAAAGAAGTTCTGAAGGGTCTTTTTGTGCCAGAACTAAAAGGAAGCGGTGCTACTGGTCTCGCGATTTCACTCCTAGGGGCTATGGTTATGCCTCACAATCTCTTCCTGCACTCAGCTCTGGTACTTTCTAGGAAAATACCACGATCAGTTCGGGGGATCAAAGAGGCCTGTAGATTTTACTTGATAGAAAGTGCCTTTGCTCTTATGGTAGCCTTCCTCATAAACGTTTCTGTTATCTCTGTGAGCGGTGCTGTTTGCAATTCTTCAAATTTGAATGCAGAAGATCAGAGGAACTGTCAGGATTTGGATCTGAACAAAGCCTCCTTTCTACTTAGAAATGTGTTGGGAAAATGGAGTTCAAAGCTGTTTGGAGTAGCTTTACTTGCATCAGGCCAAAGTTCTACTATAACAGGAACATATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTGCGACTAGAGCCATGGGTTCGGAATATGCTAACTCGTTGTTTAGCCATAGTTCCTAGCTTGATTGTTGCGGTCATTGGTGGCTCTGCTGGGGCTGGCAAGCTCATAATAATTGCATCAATGATCTTATCATTTGAGCTTCCTTTTGCTTTAATTCCACTTCTCAAGTTCACAAGCAGCAAAACCAAGATGGGAGAGCATGTCAACTCTATCATGATTTCAGCCGTTACTTGGATAATTGGTTCCCTAATTATGGCCATTAATATATATTATCTATTGACTGGCTTTGTGAAGCTGCTTCTCCACAGTCATGTTCAAGTTGTGGCCAAGGTATTTTTGGGCATACTAGGATTTTCAGGCATGGCTGTATATTTGGCTGGAATAGTATATCTGGTACTTCGCAAAAATAACAAGGCTACAAGCCTTTTGACACTAACAGCACCAGAAATCCGGCAAACAGCAAATGAACAAGGCAATGCCTCTATCCATTCTCTCTCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAGAACTAGTCCTGTTGATCTTGACTGA 1848 0.4275 MTTDSELVHSSALHHTHIFLLSSFYGPHRLASSPISVYYFPVDSCCISFCFCNQKKETKYSVSVERKEKKVERISVSKRTWLAGVVRGLALGVALPLALPLDVDQVVVPDTRSWKNLFSYMGPGFLVSIAYIDPGNFETDLQSGAQHKYELLWIILVASCAALLIQSMAANLGVVTGKHLAEHCRNEYAWATNFILWFIAEIAIVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLSTLILLALQQYGVVRKLEFLIAFLVFTIAACFFAELGYAKPVAKEVLKGLFVPELKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYLIESAFALMVAFLINVSVISVSGAVCNSSNLNAEDQRNCQDLDLNKASFLLRNVLGKWSSKLFGVALLASGQSSTITGTYAGQYVMQGFLDLRLEPWVRNMLTRCLAIVPSLIVAVIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGEHVNSIMISAVTWIIGSLIMAINIYYLLTGFVKLLLHSHVQVVAKVFLGILGFSGMAVYLAGIVYLVLRKNNKATSLLTLTAPEIRQTANEQGNASIHSLSREDIVSMQLPQRTSPVDLD 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02578 615 PANTHER METAL TRANSPORTER NRAMP6 102 609 - -
Adu07g02578 615 Pfam Natural resistance-associated macrophage protein 137 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 102 609 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 Hamap Divalent metal cation transporter MntH [mntH]. 100 526 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 116 494 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 PRINTS Natural resistance-associated macrophage protein signature 224 243 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 PRINTS Natural resistance-associated macrophage protein signature 470 489 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 PRINTS Natural resistance-associated macrophage protein signature 250 271 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 PRINTS Natural resistance-associated macrophage protein signature 438 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 PRINTS Natural resistance-associated macrophage protein signature 300 323 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 PRINTS Natural resistance-associated macrophage protein signature 410 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Adu07g02578 615 PRINTS Natural resistance-associated macrophage protein signature 196 222 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02578 Adu-Chr7 79651638 79655630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02578 96 615 Inorganic Solute Cotransporters AT1G15960 78.695 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02578 K21398 - gmx:100797298 871.307