Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02565 ATGATGATGATGATGATGAGCAAGAGCAACAGTTCCAAGTCCATAGTCAATAGTGGTAATACGGCAAAGAAGGCAAGAAGAAGCTCTTCGGAGTGCTTAGACCACATCGTGGCGGAGAGGAAGAGGAGGCAGGAGATCACTCAGAGATTCATAGCACTTTCTGCCACCATCCCTCACTTGAAAAAGATTGACAAGGTGTCAATTCTTAGTGAAGCAATCGCTTATATCAAGCAACTCAAAGAGCAAGGGAAGAAGCTAGAGGAGGAAAGCAGAAAGAAGAACAGAACAGTAGTAGAGTCGGTGTCGTTGGTGAACAAGAGGCATGATGCTGCATGTGAACTAGTTGAAGCAAGGGCGTTGGAGAAGCAGGTGTTGATTCGGATCCACTGCCATGGCCACAAAGCCGTTCCCCAAGTATTCAGCCATCTCACAAATCTTGATCTCTCCATTGTAAGCACAAGTGTCTTACCCTTTGGGACCTGTGCCATTGATATTACCATTGTTGCTCAGATGGGTGAGAAATACAGGGCAAGCATGAAGGATCTAGTTCAAAGCTTGAGACTGGCGATACCACTCTGTTAA 582 0.4588 MMMMMMSKSNSSKSIVNSGNTAKKARRSSSECLDHIVAERKRRQEITQRFIALSATIPHLKKIDKVSILSEAIAYIKQLKEQGKKLEEESRKKNRTVVESVSLVNKRHDAACELVEARALEKQVLIRIHCHGHKAVPQVFSHLTNLDLSIVSTSVLPFGTCAIDITIVAQMGEKYRASMKDLVQSLRLAIPLC 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02565 193 SMART finulus 36 85 IPR011598 GO:0046983
Adu07g02565 193 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 35 97 IPR036638 GO:0046983
Adu07g02565 193 Gene3D - 22 103 IPR036638 GO:0046983
Adu07g02565 193 MobiDBLite consensus disorder prediction 1 31 - -
Adu07g02565 193 MobiDBLite consensus disorder prediction 1 26 - -
Adu07g02565 193 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 79 IPR011598 GO:0046983
Adu07g02565 193 Coils Coil 69 96 - -
Adu07g02565 193 Pfam Helix-loop-helix DNA-binding domain 35 80 IPR011598 GO:0046983
Adu07g02565 193 PANTHER BHLH TRANSCRIPTION FACTOR 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02565 Adu-Chr7 79591109 79592273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02565 22 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.508 5.18e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu07g02565 HLH 4.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02565 - - ahf:112703796 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00101 09 857317 862399 Adu07g02565 07 79591109 79592273 PCT