Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02564 ATGGAGCAGTGTTGGGAGAACTGGCCTCTACACACGGAAATAGAGCACCATGATCATGGAGATTTCTTCTTATCATTGGAGCAGTGCCAGAAGCCACCTGATGATGATGACGATTTCCTCAGAGAAATCCTGCAGATGCCACCGGATTTTATTGACAATCATTCTACTGTGGATCTCGTCACCACCGGCACGGCGGAGAGCGCGGAGGGAAAAAGGCCCAGAACATTCATTCTCTCCTTCGATAACTCAACCATAATACCTGCCATGGCAGAGCAACAACAACCGCTGGGGGTGGGTGCGGGTGCTGCCACTACCACCCCTTTGCCCTCCTTATCAAAGAAACGGAACCTTCTTCAGAAGCCGCAGCAAGCAAGGATCCCCGTCCCCGTCCCCGTCCCCCAGCCCCAGCCAGGAGCAGCAAAGAGGAGTCGAAACGACTCTCAGATTGTGGATCACATCATGGCTGAGAGAAAAAGAAGACAGCAACTCACCCAGATGTTCATAGCTCTCTCCGCCACTATTCCTGGCTTGAAGAAGACGGACAAGGCTTCTATACTTGGGGAAGCCATTAATTACGTGAAACAGCTGCAAGAACGTGTGAGGGAGCTGGAAAAGCGGAACAATGATAACAAGAGGGGCCCAACAGAGCCAGTAATATTCCTCAACAAGACTCAGCTGCTGTGTCGGAACAACGAAGACAGCACCAGCGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGTGGAGGATTGGCGTAGCAAGGAGGAAAAACAAGTGCTGCCAGATGTTGAAGCAAGAATGCTGGAGAAGGAGAAGGAGGTGCTGATTGAGATCCACTGCGAGAAAGAGAATGGAATTGAGGTGAAGATATTGGAGCAGCTTGAAAATCTTCATCTGAGTGTGACCGGAAGCAGCGTTTTGCCATTTGGGAATTCGACTCTGGGTATTACCATCATTGCAAAGATGGGAGATGCTTACACCATGACACTCCATGATCTCCTCACAAATTTACGCCAACTGCTATTGATCAACAACACTACTGATCCGTACTAG 1053 0.5014 MEQCWENWPLHTEIEHHDHGDFFLSLEQCQKPPDDDDDFLREILQMPPDFIDNHSTVDLVTTGTAESAEGKRPRTFILSFDNSTIIPAMAEQQQPLGVGAGAATTTPLPSLSKKRNLLQKPQQARIPVPVPVPQPQPGAAKRSRNDSQIVDHIMAERKRRQQLTQMFIALSATIPGLKKTDKASILGEAINYVKQLQERVRELEKRNNDNKRGPTEPVIFLNKTQLLCRNNEDSTSEEEEEEEEEEEVEDWRSKEEKQVLPDVEARMLEKEKEVLIEIHCEKENGIEVKILEQLENLHLSVTGSSVLPFGNSTLGITIIAKMGDAYTMTLHDLLTNLRQLLLINNTTDPY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02564 350 PANTHER BHLH TRANSCRIPTION FACTOR 4 344 - -
Adu07g02564 350 MobiDBLite consensus disorder prediction 127 146 - -
Adu07g02564 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 219 IPR036638 GO:0046983
Adu07g02564 350 Coils Coil 234 254 - -
Adu07g02564 350 Pfam Helix-loop-helix DNA-binding domain 152 197 IPR011598 GO:0046983
Adu07g02564 350 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 344 - -
Adu07g02564 350 Coils Coil 186 213 - -
Adu07g02564 350 SMART finulus 153 202 IPR011598 GO:0046983
Adu07g02564 350 MobiDBLite consensus disorder prediction 234 250 - -
Adu07g02564 350 MobiDBLite consensus disorder prediction 230 256 - -
Adu07g02564 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
Adu07g02564 350 Gene3D - 139 212 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02564 Adu-Chr7 79578882 79581107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02564 143 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.226 3.48e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu07g02564 HLH 5.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02564 - - adu:107459735 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02564 07 79578882 79581107 Adu09g00101 09 857317 862399 PCT
Adu09g00103 09 887432 892830 Adu07g02564 07 79578882 79581107 PCT