Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02563 ATGTCAGAGAGGAACAGGAGACAGGAACTCTCTAGAAAGTTCATTGCACTTTCCGCAACTATACCTGGCTTGAAGAAGGCGCACGTACTTGAAGAAGCCATAAAGTACATGAAAGAACTAGAAGAGCGTGTGAAGGTGCTGGAAGAAGATGGCGAGATAAGCATAACGAGATCTCATGTGTGCGGGTGCGGCCACGAGACACTTCCAGAAGTTGAAGCAAGAGTATTTGGGAAGCAAGTGCTCATCAAAATTCACTGTGTCACTCAATGCGGCGTTCTCATCCAAATATTCTCCCAACTTCAACTCCTTCATCTTTCCATTTCCAGCAGTAACGTCTTACCATTTGGGAACACTCTTGACATCACCATTATTGCTCACATGGGTCACAAATGCAGCTTCATAGTGAAGGATCTAGTCAGAAACCTCAGACAAGTGGCTATGCTTAAGGAAGAAGAATGTCAACACCTACCAAATATACCAATCAAGTGCACTCATTAA 498 0.4398 MSERNRRQELSRKFIALSATIPGLKKAHVLEEAIKYMKELEERVKVLEEDGEISITRSHVCGCGHETLPEVEARVFGKQVLIKIHCVTQCGVLIQIFSQLQLLHLSISSSNVLPFGNTLDITIIAHMGHKCSFIVKDLVRNLRQVAMLKEEECQHLPNIPIKCTH 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02563 165 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 151 - -
Adu07g02563 165 SMART finulus 1 46 IPR011598 GO:0046983
Adu07g02563 165 Coils Coil 30 50 - -
Adu07g02563 165 Pfam Helix-loop-helix DNA-binding domain 2 41 IPR011598 GO:0046983
Adu07g02563 165 PANTHER BHLH TRANSCRIPTION FACTOR 1 151 - -
Adu07g02563 165 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 61 IPR036638 GO:0046983
Adu07g02563 165 Gene3D - 1 58 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02563 Adu-Chr7 79572639 79573446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02563 1 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 40.828 8.71e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu07g02563 HLH 2.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02563 - - adu:107459543 293.893