Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02534 ATGCAGGATTTAAGCCCCCACAACAATACTGGTCAAGCCAAAAGAATTTCAGTGGCAAGATTCATTCTGCTTCTCTGGTGTCCAATTCATGGAATTTCTATGACAAGAATGGGGATTTGCTGGGGAGAACTGTTTTCTCTGACCATTCAGATCCTGACTCATTTTGGGTTGCTATTTTGGACCCTACAGGTGCCATCTCTTTCTATGATCTTAGCAAAGGGAAGGGTGCTTTGTGATCCTTACAATGTTTGTTTCTTTGAGAACTGGTGTGAATGCCCTGCACTTCTCAAATCTCGCTTTAACTGCAAGCCACCTAATATCTCAACTTGTTCTAGGACTTCTACGGAACTTCTATATGTTGGTGAGAAGCTTGACTATTTTGCACTTGATTATGTTGCACCGGTTTCAAAATCAAACCTGAATGCCTGCAAAGAAGCTTGTTTGGGAAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAACAGCACCGGGAGATGCTTTCATTTTGATCAGACTGGAAGCTTCCAACGATTCAAGGGGGGTCCCGGCGGTTTTACTTCATATATGAAGGTGTCCATTGATGATGGAAATGACCACAAAAAGCAAAAGAATGGGATACTGCTAATTGTTGCCATAGTAGTCTTCACAGTTCTGGTCATTGTTAGTCTTGTGGCAGGGTTCTGGTACTATAACAAGAAGATGAATCTTGTTAAGCATGAACAAGACACATTGGAGGAGGATGATTTCTTGGATGGTCTCTCTGGAATGCCTACTCGATTTACTTATGGTGCTCTCTCTACGGTGACAAAGAATTTCTCCACAAAAATTGGTGAAGGAGGTTTTGGCTCTGTGTATCTTGGTGTGCTTGAAGATGGAACTCAGTTGGCTGTGAAAAAATTGGAAGGTCTTGGACAAGGGACAAAAGAGTTCAAGGCTGAAGTGTCTATAATTGGAAGCATTCATCATGTTCATCTGGTGAAGCTTAAAggcttctgcgctgagggtcctcatcgccttctcgtctatgaatacatggggaggggctctctggacaaatggatcttcaagaacagtgaaaacactttcttgttgacttgggatacaaggttcaacattgcaataggcacagccaagggattggcctatcttcatgaggagtgtgaggtgaagattgtccattgtgatattaagccgcagaatgttcttcttgatgataatttcactgctaaagtttcagatttcggactggctaagctaatgaaccgcgaacaaagccatgtggttacaactctaaggggcacaagagggtatctagcaccagaatggatcactaactatgcaatttctgagaagagtgatgtgttcagctatggcatggtcttgctggagattattggaggaaggaagaaCTATGATCAGTGGGAAGGCCCAGAGAAAGTGCATTTTCCTTCTTATGTCTTCAGAATGATGGAGGAAGGGAGACTGAGAGAAGTTATTGACAAAAGGATAGACATTGATGATAAGGATGAAAGGGCTATGATTGCTCTCAAAGTTGCTCTATGGTGTATACAAGATGATGTCAGTTTGAGACCTTCCATGACAAAGGTAGTTCAAATGCTTGAAGGTCTCTGCCCTGTACCTGATCCACCATTATCTCAGTCTAGTTCTTTCACAGCCTTCCTGAAAATGAGTAGTGGAGAAGCTTCTTCTTCAGGACAGGGAAGCTTCTATAGTAACGTGCCACTTTCTTGTGTTCAATTATCTGGTCCAAGATGA 1773 0.3192 MQDLSPHNNTGQAKRISVARFILLLWCPIHGISMTRMGICWGELFSLTIQILTHFGLLFWTLQVPSLSMILAKGRVLCDPYNVCFFENWCECPALLKSRFNCKPPNISTCSRTSTELLYVGEKLDYFALDYVAPVSKSNLNACKEACLGNCSCLVLFFENSTGRCFHFDQTGSFQRFKGGPGGFTSYMKVSIDDGNDHKKQKNGILLIVAIVVFTVLVIVSLVAGFWYYNKKMNLVKHEQDTLEEDDFLDGLSGMPTRFTYGALSTVTKNFSTKIGEGGFGSVYLGVLEDGTQLAVKKLEGLGQGTKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMGRGSLDKWIFKNSENTFLLTWDTRFNIAIGTAKGLAYLHEECEVKIVHCDIKPQNVLLDDNFTAKVSDFGLAKLMNREQSHVVTTLRGTRGYLAPEWITNYAISEKSDVFSYGMVLLEIIGGRKNYDQWEGPEKVHFPSYVFRMMEEGRLREVIDKRIDIDDKDERAMIALKVALWCIQDDVSLRPSMTKVVQMLEGLCPVPDPPLSQSSSFTAFLKMSSGEASSSGQGSFYSNVPLSCVQLSGPR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02534 590 ProSiteProfiles Protein kinase domain profile. 269 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02534 590 CDD PAN_AP_plant 135 191 - -
Adu07g02534 590 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 78 590 - -
Adu07g02534 590 Gene3D Phosphorylase Kinase; domain 1 231 343 - -
Adu07g02534 590 Gene3D Transferase(Phosphotransferase) domain 1 344 545 - -
Adu07g02534 590 CDD STKc_IRAK 275 542 - -
Adu07g02534 590 ProSitePatterns Protein kinases ATP-binding region signature. 275 298 IPR017441 GO:0005524
Adu07g02534 590 Pfam Protein kinase domain 272 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02534 590 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 78 590 - -
Adu07g02534 590 SUPERFAMILY Protein kinase-like (PK-like) 253 540 IPR011009 -
Adu07g02534 590 SMART serkin_6 269 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02534 590 ProSiteProfiles PAN/Apple domain profile. 110 191 IPR003609 -
Adu07g02534 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02534 Adu-Chr7 79388642 79391443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02534 207 549 Receptor kinase-like Gene Family AT5G20050 43.562 4.28e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Adu07g02534 Pkinase 7.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02534 - - gmx:100816004 858.211