LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu07g02490	ATGAGTGGAGCTTCGTTAACAGGCTTGCAAGACCACCTCAAACTGGCAAGAGAGTACGCTCTCGAAGGACTCTACGACACTTCCATTATCTTCTTCGACGGCGCCGTTGCTCAGATCAACAAGCATCTAAACACTGTTGAGGATCCGTTAATCCGAGCGAAATGGATGAACGTGAAGAAAGCTCTGTCGGAGGAAACCGAAGTGGTGAAGCAGCTGGATGCGGAGAGAAGGGCATTTAAGGAAACTCCTGTTGGGAATGGGAGGAGGCGTCCTGCTTCACCTCCGATCTCTACCAAATCTAACTTCGTTTTTCAGCCGTTGGATGAGTATCCAACTTCTTCATCCAGCGGTCCAGGTGGTCCCTTGGACGATCCCGATGTGTGGAGACCGCCCAGTCGAGATGATTCTAGGTCTGGTAGCGGGAGAAGGCCCGTTGTTTCTGCCCGCGGGCCTACTCGCAAGTCCCAGCAGGATGGAGCTTGGGCCCGTGGCGGCCCTACCAGGCCCGCTGCACGCGGTGCTAAGGCTGCTGGTGGTGCTGCTTCTGGTAGGGTTAACTCCGGAGCCCGGGGCGCAACCGCTGCCAAGAAAGGCACTGCTTCTGGAAAATCCAGCAAATCCGATTCAGTTAATGGTGATGGTGATGATGGGAAGACAAAGAAGGGGCAATATGAAGGTCCTGATCCGGACTTAGCTGAGATGCTTGAAAGGGACGTGTTGGAGACGTCTCCCGGAGTGAGATGGGATGATGTTGCAGGCCTCACTGAAGCCAAGAGGCTTCTTGAAGAAGCTGTTGTCCTTCCATTATGGATGCCTGAGTATTTCCAGGGGATTAGGAGACCGTGGAAAGGTGTTCTCATGTTTGGTCCTCCCGGAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGCGGTACCACTTTCTTTAATGTTTCTTCCGCAACTTTAGCTTCTAAATGGCGTGGAGAGAGTGAACGCATGGTGCGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACTTCCCTTGGGACATAGATGAGGCACTGAGGCGAAGGCTGGAAAAGCGTATATACATTCCTCTTCCGAATTTTGAGAGTCGTAAAGAGTTGATCCGTATCAATTTGAAGACTGTGGAGGTGGCCCCTGATGTCAATATAGATGACGTGGCTCGCCGTACAGAAGGCTATAGTGGAGATGATTTGACAAATGTATGTCGTGATGCTTCCCTGAATGGTATGAGGCGTAAGATAGCGGGAAAAACACGCGATGAGATCAAGAACATGCCCAAGGATGAGATTTCAAAGGATCCTGTTGCTATGTGTGATTTTGAGGAAGCTTTGAAGAAAGTCCAGCGAAGTGTTTCTCAGGCTGACATCGAACGTCATGAGAAGTGGTTTACTGAATTTGGATCAGCATAA	1602	0.4925	MSGASLTGLQDHLKLAREYALEGLYDTSIIFFDGAVAQINKHLNTVEDPLIRAKWMNVKKALSEETEVVKQLDAERRAFKETPVGNGRRRPASPPISTKSNFVFQPLDEYPTSSSSGPGGPLDDPDVWRPPSRDDSRSGSGRRPVVSARGPTRKSQQDGAWARGGPTRPAARGAKAAGGAASGRVNSGARGATAAKKGTASGKSSKSDSVNGDGDDGKTKKGQYEGPDPDLAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNSSTNEDGTRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISKDPVAMCDFEEALKKVQRSVSQADIERHEKWFTEFGSA	533

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu07g02490	533	CDD	AAA	279	422	-	-
	Adu07g02490	533	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	236	519	IPR027417	-
	Adu07g02490	533	ProSitePatterns	AAA-protein family signature.	394	413	IPR003960	GO:0005524\|GO:0016887
	Adu07g02490	533	Hamap	Meiotic spindle formation protein mei-1 [mei-1].	7	533	IPR028596	GO:0008017\|GO:0008568\|GO:0051013
	Adu07g02490	533	MobiDBLite	consensus disorder prediction	209	229	-	-
	Adu07g02490	533	Pfam	AAA+ lid domain	444	485	IPR041569	-
	Adu07g02490	533	Gene3D	-	423	509	-	-
	Adu07g02490	533	PANTHER	AAA DOMAIN-CONTAINING	5	533	-	-
	Adu07g02490	533	Gene3D	-	3	80	-	-
	Adu07g02490	533	PANTHER	KATANIN P60 ATPASE-CONTAINING SUBUNIT A1	5	533	-	-
	Adu07g02490	533	SMART	AAA_5	281	424	IPR003593	-
	Adu07g02490	533	MobiDBLite	consensus disorder prediction	93	119	-	-
	Adu07g02490	533	Pfam	ATPase family associated with various cellular activities (AAA)	285	422	IPR003959	GO:0005524\|GO:0016887
	Adu07g02490	533	MobiDBLite	consensus disorder prediction	79	229	-	-
	Adu07g02490	533	Gene3D	-	243	524	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu07g02490	Adu-Chr7	79109560	79112677	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu07g02490	237	525	Calmodulin-binding Proteins	AT3G56690	40.000	1.81e-50	184

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu07g02490	K07767		-	mnt:21402373	815.068