Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02489 ATGTGGGGTGTGGTTCCAGGTGGTGGAGCTTGCACTATAGACACCCAATCAGGATTCACACATCAAGATTTTGTGTCCATAATTTCCTCTGTTCTACTGAATATTGTCGTCATGAAGAAAGAAAACAATGTAACCAGGAACGTTGGAGACCTCCCTCGTCGATTGACTCGAGCTCAAGCTGCTGCATTTCTTGCATCTGGGCAATTGCCTCCTTCAAAGGGGGTTTCACAACAAAAAGAGAAGCAGCTTGTAAAAGGCAATCCAAAAAGAGCAGTTTCGGATAATGCATGCCTTCCACGTAAAAAGAGGGCTGCTCTTCAGGATGTGTCTAACATTTTCTGTGAAACTAAAGGCAAGGGCTGTTTGAATGCACCTAAAATTCAGTCTAAGAAAGGCAAGCTGGATAAGGCTGGTCCAAGTGGTGTTTCCAAAGTACTTAAAGAGAAGAGTTTGCCCCACTCAGGGCTTAGCTATAATGTACAAATGGCTGCAGCCGAGAAGAGTGGTGTTTATGAACTTCTAAATGTATCAAAGGGACCAGATATCACTGACATTGATGCGGATTTTGAAGATCCCCAATTGTGCAGCTTCTATGCGACTGATATCTACAAAAACTTGCGTATTGCTGAGCTATCAAGAAGGCCTTATCCTAACTACATGGAAACAGTACAGCAAGATATAACACAAAGCATGCGTGGGATACTGGTTGATTGGCTTGTAGAGGTCTCTGAGGAGTATAAATTGGTCCCGGATACTCTTTACCTCACTGTATATCTCATAGACTGGTTTCTCTCTCAAACTTACATTGAAAGACGACGACTTCAGTTGCTTGGCATAACCTGCATGCTAATTGCCTCGAAATACGAAGAAATTAATGCCCCACGCATTGAAGAATTCTGCTTCATCACAGACAACACATACACAAAAGAGGAGGTACGAAAAATGGAGACTGAAGTGTTGAAGTCCTCATCATATAAACTATTTACTCCCACTACAAAAACTTTCCTCAGGAGGTTTCTTCGGGCAGCACAAGCTTCTTACGAGAGCCCGAGCTTCGAATTGGAGTTCCTGGCAAATTACCTTGCTGAACTAACACTTATGAACTATGGTTTCTTAAATTTCCGTCCTTCTATGATTGCGGCATCTGCTGTATTTCTTGCTAGATGGACTTTAGATCGGTCAAGCCATCCATGGAATCCAACTCTTCAACACTATGCCTCTTATAAACCATCAGACTTGAAAACCACAGTTCTTGCATTACGGGATCTACAGCTGAATAGCAATGACTGCCCTTTAACCGCCATCCGCACCAAGTATGAGCAAGAGAAGTTCAAATGTGTAGCGGCTTTGTCATCACCTGAATTGCTTGACACACTGTTCTGA 1383 0.4288 MWGVVPGGGACTIDTQSGFTHQDFVSIISSVLLNIVVMKKENNVTRNVGDLPRRLTRAQAAAFLASGQLPPSKGVSQQKEKQLVKGNPKRAVSDNACLPRKKRAALQDVSNIFCETKGKGCLNAPKIQSKKGKLDKAGPSGVSKVLKEKSLPHSGLSYNVQMAAAEKSGVYELLNVSKGPDITDIDADFEDPQLCSFYATDIYKNLRIAELSRRPYPNYMETVQQDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVYLIDWFLSQTYIERRRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVRKMETEVLKSSSYKLFTPTTKTFLRRFLRAAQASYESPSFELEFLANYLAELTLMNYGFLNFRPSMIAASAVFLARWTLDRSSHPWNPTLQHYASYKPSDLKTTVLALRDLQLNSNDCPLTAIRTKYEQEKFKCVAALSSPELLDTLF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02489 460 PIRSF Cyclin_A_B_D_E 34 459 IPR039361 -
Adu07g02489 460 Gene3D - 215 328 - -
Adu07g02489 460 CDD CYCLIN 231 320 IPR013763 -
Adu07g02489 460 SMART Cyclin_C_2 330 453 IPR004367 -
Adu07g02489 460 CDD CYCLIN 330 420 IPR013763 -
Adu07g02489 460 SMART cyclin_7 237 321 IPR013763 -
Adu07g02489 460 SMART cyclin_7 334 422 IPR013763 -
Adu07g02489 460 SUPERFAMILY Cyclin-like 190 322 IPR036915 -
Adu07g02489 460 PANTHER CYCLINS 82 460 IPR039361 -
Adu07g02489 460 PANTHER CYCLIN-A2-4 82 460 - -
Adu07g02489 460 SUPERFAMILY Cyclin-like 330 455 IPR036915 -
Adu07g02489 460 Pfam Cyclin, C-terminal domain 330 452 IPR004367 -
Adu07g02489 460 Pfam Cyclin, N-terminal domain 201 322 IPR006671 -
Adu07g02489 460 Gene3D - 201 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02489 Adu-Chr7 79092727 79102515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02489 38 460 Core Cell Cycle Gene Families AT1G80370 53.463 2.75e-160 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02489 K06627 - gmx:100793657 573.163