Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02488 ATGGCCATGTTGGATGTTGACTTTAAGCTCAGCCTCTCTCTTCCCGGTACTCAAACCGGAGCCACCAAACGCTGCCGCCGCTTTCCGGAGGAGGACACCGTTGATCTTCTTCATTCCAAGGCACAGATGGTGGGGTGGCCGCCGGTGATGAGGGCAAACAGAAAGTGTGGCGTGAAGGTGGGTGTGGACGGAGCACCATATCTAAGAAAAGTGGATCTTGAAGTGTATGAGAGTTATGAAGAGCTCTTCAAGGCATTGGAGACTATGTTTTGTTGCTCAACCATTATTTGTAATGAGAATAAGGTGATGGATAATTATATGCCAACTTATGAGGACAAAGACGGTGATTGGATGTTAGTTGGCGATGTACCTTGGGAGATGTTCGTTGAATCATGCAAGAGAATAAGACTCATGATAAAGTAG 423 0.4657 MAMLDVDFKLSLSLPGTQTGATKRCRRFPEEDTVDLLHSKAQMVGWPPVMRANRKCGVKVGVDGAPYLRKVDLEVYESYEELFKALETMFCCSTIICNENKVMDNYMPTYEDKDGDWMLVGDVPWEMFVESCKRIRLMIK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02488 140 ProSiteProfiles PB1 domain profile. 55 140 IPR000270 GO:0005515
Adu07g02488 140 SUPERFAMILY CAD & PB1 domains 51 139 - -
Adu07g02488 140 Pfam AUX/IAA family 55 138 IPR033389 -
Adu07g02488 140 PANTHER AUXIN-RESPONSIVE PROTEIN IAA15 37 139 - -
Adu07g02488 140 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 37 139 IPR003311 GO:0005634|GO:0006355
Adu07g02488 140 Gene3D - 51 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02488 Adu-Chr7 79088622 79089831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02488 58 135 B3 DNA Binding Superfamily AT2G46530 39.744 5.53e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu07g02488 AUX_IAA 6.6e-35 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02488 K14484 - gmx:100500488 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02488 07 79088622 79089831 Adu07g02488 07 79088622 79089831 ECH