Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02449 ATGGCCGCGGACATGTCCAACACCAACACCAACACCAACAACAACAACAACAACCACCCTTCTCACGCCAAGGACTTCTTCGCTTCCCCAGCTCTCTCCCTTAGCCTTGCTGGCATATTTCGGCATGCTGGGGTGGCGGCGGCGGAGGGAGAGGCTGCAACCTCCAACATGGAAGTGGAGGATGGCGATGAAGGCAGCGGCGGAGGAGGAGGCGCCGGTCACACGGTGGATATTAGCAGCGAGAACTCCGGCCCCACTAGATCGAGATCGGAGGATGACTACTTTGAAGGAGAAGGTGAGCATGAAGATGAAGATATTATCGGTGATGATAACAATAACAATAACAAGAACAAGAACAAGAAGAAGAGGAAGAAATATCACAGGCACACCGCGGAGCAGATCAGAGAAATGGAAGCGCTATTCAAAGAGTCGCCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAGCTAGGCCTTGCTCCAAGACAAGTCAAGTTTTGGTTCCAAAATCGCAGAACCCAAATCAAGGCAATACAAGAGCGACATGAAAACTCATTGTTGAAGACGGAAATAGAGAAACTAAAGGAGAAAAACAAAGGGTTGAGAGAGACCATAAACAAAGCTTGTTGCCCCAACTGTGGTGTTGCAACCACTAGTACCAGAGACGGTGCCATTCCAACTGAAGAACAACAGCTTCGCATTGAGAATGCCAAACTCAAAGCTGAGATCGAGAAGCTTCGAGGAGCTTTAGGAAAATACGGTGGATCAGGTGGTGGTGGATCAACGTCTCCTTCATGTTCTTCTGGTGCTGCTGGTGGACATGAGCAAGAGAATAGAAGCTCGTTGGACTTTTACACTGGAATCTTCGGAGTTGACAAGTCAAGGATAATGGATACAGTGAACAAGGCTATGGAGGAGCTCATAACCATGGCAACAATGGGGGAACCCTTGTGGCTTCGTAGTGTTGAGACTGGCCGTGAGATACTCAACTACGATGAGTACATCAAACACTTCTCATCCCTTCAAAATTCTTCATCAAACAACACTAACACTACTCCTTCATCATCAAAGAGATCCATTATTGAAGCTTCAAGAGACACTGCCCTTGTCTTTGTTGATCTCCCACGCCTTCTCCAAACTTTCTTAGATGCGAATCAGTGGAAGGAAATGTTTCCATGTTTAGTATCTAAGGCGGCGACTGTGGATGTTATATGCAACGGAGAAGGTGTTGCTACATTGGCCGGGAGGAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGGGTTTCTGCCATGCAGTTGGTGCATCAAGCTTCCACACATGGACCAAGGTTACAAGTAAAACTGGGGAAGATATTAGGATCAGTTCACGGAAGAACTTGAACGATCCTGGTGAACCTCTTGGACTCATACTCTGCGCTGTTTCTTCTGTGTGGTTACCTGTCTCTCCTAATGTCTTGTTTGATTTCTTGAGGGATGAAACCCGCCGCACTGAGTGGGATATAATGTCCAGTGGTGGCTCAGTTCAGTCCATTGCAAATTTGGCCAAAGGACAAGACCGCGGCAATGCGGTAACCATCCAAACAATAAAATCGAAGGAAAATAGTATGTGGGTAGTGCAAGATTGCTGCACCAATGCTTATGAATCAATGGTGGTGTATGCTCCTGTGGACATCACTGGCATTCAATCTGCGATGACAGGTTGCGATTCTAGCAATCTCGCCGTACTTCCGTCGGGATTCTCGATTGTTCCTGATGGGATGGAATCAAGGCCAATGGTGATTACTTCAAGACAGGAGGAGAAGAACACAGCAGAAGGAGGATCCTTGTTCACCATAGCATTCCAGATTCTCACCAATGCATCTCCAACAGCCAAGTTAACCATGGAGTCTGTGGAATCAGTCAACACTCTCTTATCTTGTACTTTGAGAAATATCAGAACAAGTTTACAATGCGAAGATAGTTAA 1974 0.4656 MAADMSNTNTNTNNNNNNHPSHAKDFFASPALSLSLAGIFRHAGVAAAEGEAATSNMEVEDGDEGSGGGGGAGHTVDISSENSGPTRSRSEDDYFEGEGEHEDEDIIGDDNNNNNKNKNKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLKEKNKGLRETINKACCPNCGVATTSTRDGAIPTEEQQLRIENAKLKAEIEKLRGALGKYGGSGGGGSTSPSCSSGAAGGHEQENRSSLDFYTGIFGVDKSRIMDTVNKAMEELITMATMGEPLWLRSVETGREILNYDEYIKHFSSLQNSSSNNTNTTPSSSKRSIIEASRDTALVFVDLPRLLQTFLDANQWKEMFPCLVSKAATVDVICNGEGVATLAGRKSILKLAQRMTWGFCHAVGASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGLILCAVSSVWLPVSPNVLFDFLRDETRRTEWDIMSSGGSVQSIANLAKGQDRGNAVTIQTIKSKENSMWVVQDCCTNAYESMVVYAPVDITGIQSAMTGCDSSNLAVLPSGFSIVPDGMESRPMVITSRQEEKNTAEGGSLFTIAFQILTNASPTAKLTMESVESVNTLLSCTLRNIRTSLQCEDS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02449 657 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 26 410 - -
Adu07g02449 657 ProSiteProfiles 'Homeobox' domain profile. 120 180 IPR001356 GO:0003677
Adu07g02449 657 SMART HOX_1 122 184 IPR001356 GO:0003677
Adu07g02449 657 Gene3D - 108 193 - -
Adu07g02449 657 ProSitePatterns 'Homeobox' domain signature. 155 178 IPR017970 GO:0000981|GO:0006355
Adu07g02449 657 MobiDBLite consensus disorder prediction 255 279 - -
Adu07g02449 657 CDD homeodomain 127 178 IPR001356 GO:0003677
Adu07g02449 657 Pfam Homeodomain 123 178 IPR001356 GO:0003677
Adu07g02449 657 Coils Coil 231 251 - -
Adu07g02449 657 MobiDBLite consensus disorder prediction 1 23 - -
Adu07g02449 657 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 411 655 - -
Adu07g02449 657 ProSiteProfiles START domain profile. 291 406 IPR002913 GO:0008289
Adu07g02449 657 SUPERFAMILY Homeodomain-like 112 181 IPR009057 -
Adu07g02449 657 Coils Coil 179 206 - -
Adu07g02449 657 MobiDBLite consensus disorder prediction 1 24 - -
Adu07g02449 657 Pfam START domain 303 411 IPR002913 GO:0008289
Adu07g02449 657 SUPERFAMILY Bet v1-like 427 643 - -
Adu07g02449 657 MobiDBLite consensus disorder prediction 51 129 - -
Adu07g02449 657 MobiDBLite consensus disorder prediction 260 279 - -
Adu07g02449 657 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 26 410 IPR042160 -
Adu07g02449 657 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 411 655 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02449 Adu-Chr7 78796991 78805151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02449 411 656 Homeobox Transcription Factor Family AT1G79840 66.667 7.83e-114 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu07g02449 START 2.5e-10 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02449 K09338 - gmx:100808292 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02449 07 78796991 78805151 Adu07g02449 07 78796991 78805151 ECH