Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02440 ATGTCTACACCTTTGGAACATGATTACATAGGCTTAGCAGAGAAGAAGAAGATACCTTCATCATCATCTTCTTCTTCTTCTGAAGATGGAAAGACCTTCAAGGAGACTGAGTTAAGGCTTGGCCTACCAGGTTCTGAGTCTCCAGAGAGAAAACCACTTTCTGGGGTCTCTCTCTCTCTATTTGGGAACCTCAATAACAACAACAATGTCATGAACCACCATGTCCATGTGGCTGGTGCTAAGAGAGGCTTTTCTGATGCCATTGATGCTAAATGGGCTTTCTCTGATGCTCATGGATCTGACTCTGACTTGGGAAAACCTTCTGCTTTGTTTTCACCAAGAGGATCAGGGAATGTTGTTGGAAAGCCTCCATTGGACCCCAAAAGCATTAGCACCCAGCAAGGAAATTCCATTAACACCCCTGCTTCTGCTTCACAATCCATCAAAGAGTCCAAGCCTCTTCAGGAAAAGAACCCTCCACTTCCTGCTACTAATGAACATGCTAGTGCTCCTGCTTCTAAGGCACAGGTTGTGGGGTGGCCACCAATTCGATCGTTTCGAAAGAACACCATGGCCTCTAATTTGACAAAGAACAATGATGAAGCTGAAGGGAAACCGGGATTTGGTTGTTTGTATGTGAAGGTAAGCATGGATGGTGCTCCTTATCTAAGAAAGGTTGATCTCAAAACCTATAGCAACTATAAGGAACTTTCTTCAGCTCTTGAGAAGATGTTTAGCTGCTTCACCATTGGTCAGTGCAACTCTCCTGGGCTGCCTGGAAAAGATGGATTAAGTGAGAGCTCTTTGAGGGATCTTCTCCATGGCTCTGAATATGTTCTTACTTATGAAGACAAGGATGGAGATTGGATGCTTGTGGGAGATGTTCCTTGGGAGATGTTCACTGACTCATGCAGGAGACTGAGGATCATGAAAGGGTCTGAGGCAATTGGACTAGCTCCAAGAGCAGTGGAAAAATCAAAGAGCCAAAACTAG 993 0.4471 MSTPLEHDYIGLAEKKKIPSSSSSSSSEDGKTFKETELRLGLPGSESPERKPLSGVSLSLFGNLNNNNNVMNHHVHVAGAKRGFSDAIDAKWAFSDAHGSDSDLGKPSALFSPRGSGNVVGKPPLDPKSISTQQGNSINTPASASQSIKESKPLQEKNPPLPATNEHASAPASKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYLRKVDLKTYSNYKELSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAVEKSKSQN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02440 330 MobiDBLite consensus disorder prediction 97 175 - -
Adu07g02440 330 SUPERFAMILY CAD & PB1 domains 210 311 - -
Adu07g02440 330 Pfam AUX/IAA family 35 321 IPR033389 -
Adu07g02440 330 ProSiteProfiles PB1 domain profile. 210 312 IPR000270 GO:0005515
Adu07g02440 330 MobiDBLite consensus disorder prediction 1 53 - -
Adu07g02440 330 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 322 IPR003311 GO:0005634|GO:0006355
Adu07g02440 330 PANTHER AUXIN-RESPONSIVE PROTEIN 5 322 - -
Adu07g02440 330 MobiDBLite consensus disorder prediction 127 153 - -
Adu07g02440 330 Gene3D - 207 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02440 Adu-Chr7 78706574 78708878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02440 212 315 B3 DNA Binding Superfamily AT1G19850 33.962 2.24e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu07g02440 AUX_IAA 1.8e-92 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02440 K14484 - gmx:100804423 416.001