Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02413 ATGCATAAGTTTGTTCCTCTCGTTTGTCTTATTATTATTATGAGTATGGTTAAAATAGTGTTAGGAACAGCAATCGAAGTGAATAAGGGCATAGTAGGAGTTGTTGCAGACTATAATGATAGAAGTGGAAAAGAGGAAATAGTGGCTATTAAGATGGCATTGGAGGATTTCTATCATTACACCAATCAAAGCTTTGGTCTTCACATAAGGGACTCTCATGGGGATCCCCTTAAAGCTGCTCTTGCAGCAAGGGACCTTATTGACAAAGAGCAAGTGCAAGCAATTATAGGTCCACAAACATGGGAAGAAACAACATTAATAGCTGAACTTTGCAACCAAAACATGACACCTCTTCTATCCTTAGCAGATGTAACTCCAAATTGGGCAACATCAAAATGGCCCTTCATGGTTCAAACTTCACCTAATGCATTAAAACAAATGAAAGCAGTATCTGCTATTGTTCAATCATGGGATTGGTACAGTGTCAACATAATTTATGAAGACAAAGATGCTTCATCCACAGAATCTTTATCCAATATCTATTTAGCACTCACTGAAGCAGGTATCACAATAAGTAATCTCTTGAGTGTTCCTCCTTTTCCTTCCTCTTCATTGTCCAAAGATCTTGAGAATCTTAGAGATGGCCATTGTAGAGTCTTTGTTGTTGTTAGTTTGTCCCTCAATTTGGCCATAAACCTCTTCGAAACTGCGTCGAAAATGGATATGGTTGGGAAGGACTATGTTTGGATCATTACTGACCCTTTTACAAGCCTTGTTCATTCCTTAAATGCTTCAACTATATCCTCAATGCAAGGAATCATTGGAGTCAAGAGCTATTTCCAAGAAAATGGGAAAAAACATGAGGATTTCTACCGGAAATTTCGTCGAAAATTTAGCCTAGATTACCCTCAAGAACTCAACAATGAGCCAGGAACTTTTGCAGCACATGCTTATGATGCTGCATGGACTCTGGCTCTAGCCATGAGTCAAACCAACAATAATGAAGGTGGCAAATTCCTGATGAACAAGATTTTGCATAGTAATTTTCTTGGCCTAAAGGGAAGAATTCAATTCAATGATCATACCTTAGATCCTACACAGACTTTTCAAATCATCAATGTGATTGGGAAGGGATACAAGGAGATTGGTTTTTGGTCAAATGGACTTGGATTTTCAAGCAATATTGGTCAACATGATGTTAGTTATAGTTCTTCAATGAAGGAACTAGGACAGGTTATGTGGCCAGGTAGACCTTGGGAAACTCCAAGAGGGTGGGCCCTACCAACAATTGAGAAGCCATTAAGAGTTGGGGTCCCTGCTTTGTCCACATTGAAGCAATTTATAAACATAACTCATGATCAATTTCAGGGATTCACTATTGATCTTTTCAAAGCAACTATGGACTTGATGCCCTACCATGTTCCATACAAGTTCTATGCTTTCAATGATACTTATGATGAGTTGGTGAGACAAATTTATTTGAAGAATTTTGATGCAGTAATTGATGTAACAATAATCTCGTACCGGTACCAGTATGCCGAATTCACTCAGCCATACACTGATCCTGGAGTGGTGATGGTAGTCCCTTTGAAATCAAAAACAGGACACAGAGCTTGGCTGTTTGTGAAGCCTTTCACAAAGACAATGTGGATCCTAATAGTGTTAGTGATTATCTACAATGTCTTTGTTTTATGGATGCTAGAAAGAAATCATTTCTGTGAACTCAAGGGCTCCATACTCAAACAATATGGCAACATTGCTTGGTTGGCAATGACCCCTCTCGTAAACTTAAATGGAGATAAATTACACAACAATTTATCAAGGGTGGCTATGGTGGTGTGGTTATTTGTGGCCCTCATTATAATGCAGACATACACAGCCAACTTAACCAGCATGCTAACAGTTGAAAGACTTGAACCAACAATAGGTGATGTTGATCAGTTAAGAAATAACAATGCCATGGTTGGATACAGTACTGGATCTTTCTTGAAAAATTATCTTCATGATGTTCTACACTTTAACCCTGCAAACATAAGGCAATTTAGATCACATGAAGAGTTCGCTGAAGCTCTCAGAAGAAAAGAAATAGCAGCTGTCTTTATTGAAGCTCCTGGGGCCAAGATTTTCCTTGCAAAGTACTGTAAAGAGTTTATTCAAGCCGGGCCCATGTATAAAATCGGAGGATTCGGTTTCGCTTTTCCGCAAGGATCTCCATACCTTCCACTTGTGAACAAAGCACTGTTGGATTTATTTGAATCCGGAAAACAGAGGGAACTGGAGAACAGAATGCTTGCATCAGAGAAATGTGAAGAGTCTGAACCGGACACCGAAACTGCCAGTCTTAGCCCAAACAGCTTCTGGGCCTTGTTCACTTTGACAGCAGGTACATCAACAATTTCCCTCTTGATTTATGTCACCGGCACCAATTGGTTAACCTCCGCGGTGATTGAACAATTGGGACAAGCCAAGAGACGACTCTCAAGAAAAGATAGTCATGTTGCAGAAAGTCCTGTGAACTCTCCACATTCAGATTCACATGTTATGCAACTTCCTCAAGCTTGA 2562 0.3958 MHKFVPLVCLIIIMSMVKIVLGTAIEVNKGIVGVVADYNDRSGKEEIVAIKMALEDFYHYTNQSFGLHIRDSHGDPLKAALAARDLIDKEQVQAIIGPQTWEETTLIAELCNQNMTPLLSLADVTPNWATSKWPFMVQTSPNALKQMKAVSAIVQSWDWYSVNIIYEDKDASSTESLSNIYLALTEAGITISNLLSVPPFPSSSLSKDLENLRDGHCRVFVVVSLSLNLAINLFETASKMDMVGKDYVWIITDPFTSLVHSLNASTISSMQGIIGVKSYFQENGKKHEDFYRKFRRKFSLDYPQELNNEPGTFAAHAYDAAWTLALAMSQTNNNEGGKFLMNKILHSNFLGLKGRIQFNDHTLDPTQTFQIINVIGKGYKEIGFWSNGLGFSSNIGQHDVSYSSSMKELGQVMWPGRPWETPRGWALPTIEKPLRVGVPALSTLKQFINITHDQFQGFTIDLFKATMDLMPYHVPYKFYAFNDTYDELVRQIYLKNFDAVIDVTIISYRYQYAEFTQPYTDPGVVMVVPLKSKTGHRAWLFVKPFTKTMWILIVLVIIYNVFVLWMLERNHFCELKGSILKQYGNIAWLAMTPLVNLNGDKLHNNLSRVAMVVWLFVALIIMQTYTANLTSMLTVERLEPTIGDVDQLRNNNAMVGYSTGSFLKNYLHDVLHFNPANIRQFRSHEEFAEALRRKEIAAVFIEAPGAKIFLAKYCKEFIQAGPMYKIGGFGFAFPQGSPYLPLVNKALLDLFESGKQRELENRMLASEKCEESEPDTETASLSPNSFWALFTLTAGTSTISLLIYVTGTNWLTSAVIEQLGQAKRRLSRKDSHVAESPVNSPHSDSHVMQLPQA 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02413 853 CDD PBP1_GABAb_receptor_plant 32 395 IPR044440 -
Adu07g02413 853 Gene3D - 430 536 - -
Adu07g02413 853 Gene3D - 40 367 - -
Adu07g02413 853 SMART GluR_14 433 766 IPR001320 GO:0015276|GO:0016020
Adu07g02413 853 PIRSF IGluLR_plant 1 851 IPR017103 -
Adu07g02413 853 Gene3D - 537 670 - -
Adu07g02413 853 Pfam Ligand-gated ion channel 763 795 IPR001320 GO:0015276|GO:0016020
Adu07g02413 853 SUPERFAMILY Periplasmic binding protein-like I 32 425 IPR028082 -
Adu07g02413 853 MobiDBLite consensus disorder prediction 827 853 - -
Adu07g02413 853 Pfam Bacterial extracellular solute-binding proteins, family 3 452 762 IPR001638 -
Adu07g02413 853 Gene3D - 142 387 - -
Adu07g02413 853 MobiDBLite consensus disorder prediction 833 853 - -
Adu07g02413 853 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 23 843 - -
Adu07g02413 853 CDD GluR_Plant 432 764 - -
Adu07g02413 853 SUPERFAMILY Periplasmic binding protein-like II 411 762 - -
Adu07g02413 853 Pfam Receptor family ligand binding region 49 375 IPR001828 -
Adu07g02413 853 PANTHER GLUTAMATE RECEPTOR 23 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02413 Adu-Chr7 78398156 78408551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02413 1 853 Ion Channels AT5G11180 31.202 1.40e-128 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02413 - - var:108332761 1121.3