Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02390 ATGTCGCATCCGGGGAAGCCCGTTACCGAGTTGGATTCGGTCACTGACCGATTCCGTGACTCACTGAGTTGCGAGGCCGCCAGTCGAGACGCTAACAAACCAGATTTCCGCGAACTCGATCTGGGCTCGCCAGTATCGCCGCTTCGTACGGCTCACCACGCGGTCGGCGCCGCTGGAAACGGAGGACCTGCCGCCAGTAGCAGCTCAAGCTCATCCGGATCCTTCTCGGGTCGAACCAACCCGGTTTCCAGAAGATCCGATTCGGGACACACCAACAGCAACGGCAACAACAACCACTCTGGCGAGCTTTCTGGTTCAAGTGAGAACAGCCCAACCGCAACCGGCGGCGGGAACACTCGGATCCTGAAACCGGGTCAAGCGAGATCTGATTCAATCTATTCAGGTCAGAACGGAGGCTCCTCCTCCTCTTCCTCCTCAGCCGTGAATTCGCCGCCGCTGAACGTCCTCCCCACCGGAAACATCTGTCCCTCCGGTAGGATCGTGAAGACAGGCATGGCGGCGAATCGGAGCTCGAGGAGCGACGTTTTGGGCTCCGGCATGGGGAATTACGGCCACGGAAGCATAATTCGCGGCGGCGGAAAGAGCGGCAGCAGCACGCCTGATTCGCCAGGGATCCCAAGCGTGCGGTCGAGCAGCGGCATTGGCGGCGAAGGCAATGTGGCGAAGAGGGGAGCGACGCAGGGTTCGGATCCGGAGGAGCTGAAGAGAGCTGGGAATGAGCATTACAAGAGGGGCCACTTCGCCGAGGCATTAGGGTTATATGATCGGGCAATTGCGCTTTCTCCGGCAAGTGCCGCCTACCGGAGCAACCGCGCGGCGGCCCTTACAGGTCTTGGGAGGCTAGGTGAGGCTGTGAGGGAGTGTGAAGAGGCTGTGAGGTTGAATCCTAATTATGGCAGGGCTCATCATCGTTTGGCATCTCTTTTCTTAAGGTTGGGGCAAGTTGAGAATGCAAGGAAGCACCTTTGTTACCCTGGGATGCCTCATCTCTTTATGTGTAGAGCAGAAGCACTGTTGAAGTTACACCAAATTGACGATGCAGAATCAATTTCGATACATGTACCCAAATCGGAGCCACTTACTATTTCCTCTTCTCAAGCTAAATTTTTTGGAATGCTTTCTGAAGCTTATGTGTATTTCGTGAGAGCTCAGATTGAGATGGCATTGGGAAGGTTTGAGAATGCAGTTAAAGCAGCTGAGAAAGCCAGTCAAATGGACCCCCGGAACGTTGAAGTTGCTGTTTTGGTGAACAATGTGAGGATGGTGGCGAGAGCTCGAGTGCGTGGCAATGATCTTTTCAAATCAGAAAGGTTTACCGAAGCTTGCTCCGCATATGGAGATGGTTTGAGGCTTGATCCTTCAAATTCAGTTCTATATTGCAACAGAGCAGCTTGTTGGTTTAAGCTTGGGCAATGGGAAAGATCAATTGAAGACTCCAATGATGCTTTGAAAATCCAACCTAACTACACTAAAGCTCTTCTTCGAAGGGCCGCATCAAACAGTAAGCTTGAAAGGTGGGAAGAGGCAGTCAAGGACTATGAGGTCTTGCGGAAAGAACTTCCAAATAACAATGAAGTTGCCGAAGCTCTTTTCCACGCACAGGTTGCATTGAAGAAATCTCGTGGGGAAGAAGTATATAATTTAAAATTCGGCGGTGAAGTGGAACAAGTGTCGGGTCTTGAGCAGTTTAGAGCTGCAATAACTTTACCAGGTGTTTCTGTTGTCCATTTCGAAATTGCATCTAACTCGCAATGCAAGCAAATATCGCCCTTTGTGGATACACTATGTGGTCGATATCCATCCATCAACTTCCTCAAGGTGGATATTCAAGAAAACCCAACCGTTGCAACTGCTGAGAATGTTAGGATCGTACCAACCTTCAAGATATACAAAAACGGCAGCCGAGTGAAGGAAATCTTCCCATGTTCTTGCTACTTCCCAAAACCTCCGTTCAAACTCTCCGGTCCCAACTACGGTTCTTCCAGTCTCTTTGATCCCATCATAAAAGCAATCTCCCGATACCTGTGA 2049 0.5105 MSHPGKPVTELDSVTDRFRDSLSCEAASRDANKPDFRELDLGSPVSPLRTAHHAVGAAGNGGPAASSSSSSSGSFSGRTNPVSRRSDSGHTNSNGNNNHSGELSGSSENSPTATGGGNTRILKPGQARSDSIYSGQNGGSSSSSSSAVNSPPLNVLPTGNICPSGRIVKTGMAANRSSRSDVLGSGMGNYGHGSIIRGGGKSGSSTPDSPGIPSVRSSSGIGGEGNVAKRGATQGSDPEELKRAGNEHYKRGHFAEALGLYDRAIALSPASAAYRSNRAAALTGLGRLGEAVRECEEAVRLNPNYGRAHHRLASLFLRLGQVENARKHLCYPGMPHLFMCRAEALLKLHQIDDAESISIHVPKSEPLTISSSQAKFFGMLSEAYVYFVRAQIEMALGRFENAVKAAEKASQMDPRNVEVAVLVNNVRMVARARVRGNDLFKSERFTEACSAYGDGLRLDPSNSVLYCNRAACWFKLGQWERSIEDSNDALKIQPNYTKALLRRAASNSKLERWEEAVKDYEVLRKELPNNNEVAEALFHAQVALKKSRGEEVYNLKFGGEVEQVSGLEQFRAAITLPGVSVVHFEIASNSQCKQISPFVDTLCGRYPSINFLKVDIQENPTVATAENVRIVPTFKIYKNGSRVKEIFPCSCYFPKPPFKLSGPNYGSSSLFDPIIKAISRYL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02390 682 Pfam Thioredoxin 570 645 IPR013766 -
Adu07g02390 682 MobiDBLite consensus disorder prediction 25 160 - -
Adu07g02390 682 MobiDBLite consensus disorder prediction 199 221 - -
Adu07g02390 682 Pfam Tetratricopeptide repeat 384 416 IPR019734 GO:0005515
Adu07g02390 682 SUPERFAMILY Thioredoxin-like 526 645 IPR036249 -
Adu07g02390 682 SMART tpr_5 497 530 IPR019734 GO:0005515
Adu07g02390 682 SMART tpr_5 238 271 IPR019734 GO:0005515
Adu07g02390 682 SMART tpr_5 383 416 IPR019734 GO:0005515
Adu07g02390 682 SMART tpr_5 429 462 IPR019734 GO:0005515
Adu07g02390 682 SMART tpr_5 463 496 IPR019734 GO:0005515
Adu07g02390 682 SMART tpr_5 272 305 IPR019734 GO:0005515
Adu07g02390 682 MobiDBLite consensus disorder prediction 172 240 - -
Adu07g02390 682 Pfam Tetratricopeptide repeat 499 529 IPR019734 GO:0005515
Adu07g02390 682 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL1 11 334 - -
Adu07g02390 682 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL1 335 647 - -
Adu07g02390 682 MobiDBLite consensus disorder prediction 62 119 - -
Adu07g02390 682 SUPERFAMILY TPR-like 237 419 IPR011990 GO:0005515
Adu07g02390 682 Gene3D Glutaredoxin 556 649 - -
Adu07g02390 682 ProSiteProfiles TPR repeat profile. 463 496 IPR019734 GO:0005515
Adu07g02390 682 Gene3D Tetratricopeptide repeat domain 232 330 IPR011990 GO:0005515
Adu07g02390 682 Gene3D Tetratricopeptide repeat domain 331 549 IPR011990 GO:0005515
Adu07g02390 682 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 11 334 IPR044534 -
Adu07g02390 682 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 335 647 IPR044534 -
Adu07g02390 682 Coils Coil 389 409 - -
Adu07g02390 682 ProSiteProfiles TPR repeat profile. 383 416 IPR019734 GO:0005515
Adu07g02390 682 ProSiteProfiles TPR repeat profile. 238 271 IPR019734 GO:0005515
Adu07g02390 682 CDD TRX_family 568 646 - -
Adu07g02390 682 SUPERFAMILY TPR-like 433 546 IPR011990 GO:0005515
Adu07g02390 682 MobiDBLite consensus disorder prediction 129 157 - -
Adu07g02390 682 Pfam Tetratricopeptide repeat 244 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02390 Adu-Chr7 77941200 77943785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02390 428 573 U-box Gene Family AT3G07370 28.415 2.68e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02390 - - adu:107459775 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02390 07 77941200 77943785 Adu07g02390 07 77941200 77943785 ECH