Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02364 ATGGGCCCTCACTACTGCATACGAAATTGCAGTTCGATAGTCATAGAAGATGCAAGAGCGGGAAATGGTGATGTCTTTTGTGAGGAAAACTTTCAGATTCAGATAGTGGCCGTGCTTCACTGTCCAGGTCCACGTGAACTTCCCAACCAGTGTCTGATAAAGCGAAACAAGAAGACCTCGACATTTTATCTATATCTTGCCTTAACACCATCATTCACAGACAAAGGGAAGTTTTTGTTGGCGGCTAGAAGATACAGGTTTGGTACCCATACTGAATATATAATATCACTTGATGCCGAGGACTTATCCCAAGGAAGCAATGCTTATGTTGGAAAATTAAGCTCGGATTTTCTTGGCACCAACTTCACAATTTACGACAGTCAACCACCCCATGCTGGTGCAAAACCATCGAGTGGCAGGTCTAGTCGCCGTTTTGCCAGCAAACAGATAAGCCCTCAAGTTCCTGCTGGTAACTTTGAAGTGGGGCAGGTCTCCTACAAGTTCAACCTCTTGAAATCAAGAGGGCCAAGGAGGATGGTTTGCTCCCTCAAGTGTCCCGCAACACCATTGGGAGAAACTTCAGATATCACATCATTGGACGGCAACAAGACAAACAGTAAAGATCAAGCTACTCCTACCTGCACAGTCTTGAAGAACAAAGCACCAAGGTGGCACGAGCATTTGCAGTGCTGGTGCTTGAATTTTCATGGCCGCGTGACAGTAGCATCCGTGAAGAACTTTCAGCTGGTTGCTACGGTGGACCAAAGCCAACCAGGAGGGAAAGGAGATGAGGACACGGTTCTCCTGCAGTTTGGCAAAGTGGGGGATGATACTTTCACCATGGATTATAGGCAGCCCTTATCTGCCTTTCAGGCATTTGCCATTTGCTTGACTAGCTTTGGCACTAAACTGGCATTGACAGCTCATATGGTTGGCCCTTGA 942 0.4671 MGPHYCIRNCSSIVIEDARAGNGDVFCEENFQIQIVAVLHCPGPRELPNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRYRFGTHTEYIISLDAEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHAGAKPSSGRSSRRFASKQISPQVPAGNFEVGQVSYKFNLLKSRGPRRMVCSLKCPATPLGETSDITSLDGNKTNSKDQATPTCTVLKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPGGKGDEDTVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLALTAHMVGP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02364 313 PANTHER TUBBY-RELATED 31 305 - -
Adu07g02364 313 MobiDBLite consensus disorder prediction 129 149 - -
Adu07g02364 313 Pfam Tub family 41 302 IPR000007 -
Adu07g02364 313 Gene3D Tubby Protein; Chain A 32 307 IPR025659 -
Adu07g02364 313 SUPERFAMILY Tubby C-terminal domain-like 37 306 IPR025659 -
Adu07g02364 313 ProSitePatterns Tub family signature 1. 235 248 IPR018066 -
Adu07g02364 313 PANTHER TUBBY-LIKE F-BOX PROTEIN 7 31 305 - -
Adu07g02364 313 PRINTS Tubby superfamily signature 93 109 IPR000007 -
Adu07g02364 313 PRINTS Tubby superfamily signature 285 307 IPR000007 -
Adu07g02364 313 PRINTS Tubby superfamily signature 158 185 IPR000007 -
Adu07g02364 313 PRINTS Tubby superfamily signature 217 234 IPR000007 -
Adu07g02364 313 PRINTS Tubby superfamily signature 264 283 IPR000007 -
Adu07g02364 313 PRINTS Tubby superfamily signature 235 251 IPR000007 -
Adu07g02364 313 PRINTS Tubby superfamily signature 109 133 IPR000007 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02364 Adu-Chr7 77595255 77599195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02364 32 305 TUB Transcription Factor Family AT1G53320 79.286 9.06e-160 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Adu07g02364 Tub 2.7e-101 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02364 K19600 - gmx:100808096 488.034