Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02358 ATGAATAATAGGTTCAACAACAAGAATCATCCAATAATAAAAGATCCATCATCATCATCATCATCAAGAAGCTATGCCAACGGTGAAGACTACATGATGATGAGTGGTTTTCCATGGCCACCAAGATCATACTCATGCAGCTTCTGTAGAAAAGAGTTCAAGTCAGCACAAGCACTTGGCGGACACATGAATGTTCATAGAAGAGATAGAGCAAGGTTGAGGCATCAATCACCACCTCCATTATCAACTAATCTTCATCATCAAGTTCCTAATCTCAACCTTAATCTTAACCCTATTATTATTACTACTACTACTACTACTACTACTACTAGTACCTCTAACCCTAACTTGTCATCATACAAAAAACCTTCCACTACTACATTGCCCTTGTTTCTTATGGATGGTGTTTTACTTAGCCCTTTGAGCACAAAACCCAACAACATTCTGGATCAAGTTGAAGGATATGATGGTAATTTCGCAAGAAGAGAAGATGAAGAAGGGTGCAAGATCTTGAAGAAAGGTGAGATTCTGAGAGTGGATTTGGAGATAGGGTTGCCTATTCCTTCTACTACTACTACTACTACTAAAAAAGTTGATTATGATTTGGATCTTGAGCTTCGTTTGGGTACTTGCTCTTAA 639 0.3803 MNNRFNNKNHPIIKDPSSSSSSRSYANGEDYMMMSGFPWPPRSYSCSFCRKEFKSAQALGGHMNVHRRDRARLRHQSPPPLSTNLHHQVPNLNLNLNPIIITTTTTTTTTSTSNPNLSSYKKPSTTTLPLFLMDGVLLSPLSTKPNNILDQVEGYDGNFARREDEEGCKILKKGEILRVDLEIGLPIPSTTTTTTKKVDYDLDLELRLGTCS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02358 212 MobiDBLite consensus disorder prediction 1 24 - -
Adu07g02358 212 Gene3D Classic Zinc Finger 40 87 - -
Adu07g02358 212 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 133 211 - -
Adu07g02358 212 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 5 148 - -
Adu07g02358 212 PANTHER OS07G0101800 PROTEIN 5 148 - -
Adu07g02358 212 PANTHER OS07G0101800 PROTEIN 133 211 - -
Adu07g02358 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 71 IPR013087 -
Adu07g02358 212 SUPERFAMILY beta-beta-alpha zinc fingers 41 70 IPR036236 -
Adu07g02358 212 Pfam C2H2-type zinc finger 44 68 - -
Adu07g02358 212 ProSitePatterns Zinc finger C2H2 type domain signature. 46 66 IPR013087 -
Adu07g02358 212 SMART c2h2final6 44 66 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02358 Adu-Chr7 77415467 77416105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02358 29 209 C2H2 Transcription Factor Family AT3G23130 35.922 5.49e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu07g02358 zf-C2H2_6 3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02358 - - aip:107610839 359.762