Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02340 ATGGAGAATAATAACAGTGGGAGAAAGGAGGCAATAGAACAAGAGCTAATAAGAGGGCGTGACGTGGCAAAACAGCTACTTGAAGTACTTATTATTCATAAATCCAATAGAAATGAAGAAGGAATTGAAAGGTCAATGGTGAAGATGCCTTTTGTTGAAGATGCTGTGCGCAAGATTTTCATATCATTCACAAACACCCTCTTGCTATTCAACAGCGACACCCAACATAACCGCTCTGATATTCATCAAGGTTGCAAGAAAAGTAAGAGACCACCAACCCTATGCCACAAGAGAAAATCATTTGCACCAACTTGGAGTATCGACAACGCGATTCTATCAGAAGATGGGCTTGAATGGAGAAAGTATGGACAGAAAAAGACAAAGGACTGCAGATATATAAGGAGCTACTACAAGTGCAGTTACAAGAATGAAGAAGATTGCAAAGCCATCAAACATGTTCAAAGAATCCAAGAGGATCCTCCATTATACCGTACAACCTATTCTGGCCATCACACTTGCAAATGCTCTTTTGTCAATTACCCTCACATGAAACTAGAATCTGCTCCTTCTTTACAAGAATCTTCTAAATTACTAAGTTTTAATAATAATTATTATAACAATAATACCCTCCAAAGCAAAGAGATGAAACACCTTTCATCATCAATTTCTTCTACAAAACAAGAGCCTGTGGAAGTGATTATTCCTAATGATGACCATAATCAAATCCATCTTCTAAGTGACTGTGAGCTTGATTTCAATTATTCATCCACCGAATCTGTTGCATTCGACATTTTCATGGGAATGTTTAAATTTTGA 816 0.3713 MENNNSGRKEAIEQELIRGRDVAKQLLEVLIIHKSNRNEEGIERSMVKMPFVEDAVRKIFISFTNTLLLFNSDTQHNRSDIHQGCKKSKRPPTLCHKRKSFAPTWSIDNAILSEDGLEWRKYGQKKTKDCRYIRSYYKCSYKNEEDCKAIKHVQRIQEDPPLYRTTYSGHHTCKCSFVNYPHMKLESAPSLQESSKLLSFNNNYYNNNTLQSKEMKHLSSSISSTKQEPVEVIIPNDDHNQIHLLSDCELDFNYSSTESVAFDIFMGMFKF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02340 271 Pfam WRKY DNA -binding domain 114 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g02340 271 Gene3D WRKY domain 102 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g02340 271 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 263 IPR044810 GO:0003700
Adu07g02340 271 ProSiteProfiles WRKY domain profile. 108 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g02340 271 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 263 - -
Adu07g02340 271 SMART WRKY_cls 113 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g02340 271 SUPERFAMILY WRKY DNA-binding domain 107 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02340 Adu-Chr7 76833645 76838462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02340 5 181 WRKY Transcription Factor Family AT5G01900 32.161 4.82e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu07g02340 WRKY 1.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02340 - - aip:110265453 479.559