Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02306 ATGGACTCAAACACACAGAAATACAGACCCACCAAGCTTAGCATGCGGATCATATTTAAGAGGGACACATTGGTGTCTGGTGCTGATGACATGGATATTCCAATTGAGTCATTTGATTTCGTGGCAACCAAGGAAATCTTATCATCCGTTAAGGATGACTTATATCTTATTGATTTTGTTGGTCTACTGTCCGCAAAGAGTGAGTTGATTCCTTTTGAATATAGGAATCGGAAGTCACATTACATGAAAATCGAGCTTGATGATCTGAGTGAGAAGCTTTCATGCACCTTGTGGGAAAATTATGCCTCTGAATTGATAACTCTTCTTGATGCGAACAAGGCCACTGAATTTATAATTGTGCTCCAATTTGCCAAGATGAAGTTCTACAATGGTGTTATGACTATAACCAACACAAACTACACCACAAGGCTCACGGTTAATGCTAATCTTGAAGTGGTTAAGAAATTCTGTCAAAACAAGCACAGCACCAGCGTTGAAGTTATTGGCCGGGTTGTGAGGCATTCTCCATCTGAAGATTTTCTCAGCCTTACCCCTTATGCTACCATACATCAAATAAAGGAAACTCTTGAGAAATCAACCTTCGTCACATGTGGAACGGTAATCGACATTGACAGGGATCATGCATGGTGGTACAAGGCTTGCAGGCAATGCACACAAGGACTGGAGGCACTTACTGACCAATTTTATTGTGCAAAGTGCGATGTTTACTCTACAGTTTTTGCCCCCAGGTTCTGCATTCAGGTTCGTGTTGGTGATGAGTCAGATACCGCAACTTTTGTTCTATTTGAGAATTGTGCGTCAAAGTTCTTAGGTCTAACTGCCGCTGAGATCCGCACCAGACTGCTTGCTAGGGGATATGGAAGAGACCATTTCCCAGATGAGCTTAATACACTGATTGGGAGGACACTTCTGTTCAAGCTTACTGTTAGGCATGATAGCTTAAATAAATTTCAGCCATGCGTGATTACCGTTTCAAGGATATGTTCTGACCCAGACATTATCTCCTCACTTGCTTTAGAAAAGAACATTAAATTGGTGTGTGTCGTTGAGTGCTCCACAGAGGACTTTCAATTACCATTGCTTATTCAAATGTTGTTGCTTTTTGTATTCCTTAACACTTTACAATCACAATATCATATGTTCCAGGATGCACTGCAGAAATTGACCACGGCTGCGGTTGTTCGAAGCAGTGACTTGGTTGGGTCTGAGAGCATACTCGGCGTCCGTGGATCCACCACCACTCCGAGTCCCAATTCTGATGCAGTTTCTGGTCACGGGGCTGCCCACGTGGTTACACATACTCCTGTTAAGCGGGTTTGCATTAGATCCGGCGGCGACTTCTCATCCCGTGCCACACCCTCAGCCTCCAAGAGTCTCCTCCCTGCCTTTGAGAGCTGCGTCCTAGGGAATGTCACCAACCCTGATGCAGGGGACATATGA 1461 0.4408 MDSNTQKYRPTKLSMRIIFKRDTLVSGADDMDIPIESFDFVATKEILSSVKDDLYLIDFVGLLSAKSELIPFEYRNRKSHYMKIELDDLSEKLSCTLWENYASELITLLDANKATEFIIVLQFAKMKFYNGVMTITNTNYTTRLTVNANLEVVKKFCQNKHSTSVEVIGRVVRHSPSEDFLSLTPYATIHQIKETLEKSTFVTCGTVIDIDRDHAWWYKACRQCTQGLEALTDQFYCAKCDVYSTVFAPRFCIQVRVGDESDTATFVLFENCASKFLGLTAAEIRTRLLARGYGRDHFPDELNTLIGRTLLFKLTVRHDSLNKFQPCVITVSRICSDPDIISSLALEKNIKLVCVVECSTEDFQLPLLIQMLLLFVFLNTLQSQYHMFQDALQKLTTAAVVRSSDLVGSESILGVRGSTTTPSPNSDAVSGHGAAHVVTHTPVKRVCIRSGGDFSSRATPSASKSLLPAFESCVLGNVTNPDAGDI 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02306 486 CDD RPA1_DBD_B_like 58 156 - -
Adu07g02306 486 CDD RPA1_DBD_C 189 322 IPR013955 -
Adu07g02306 486 Gene3D - 31 167 IPR012340 -
Adu07g02306 486 Pfam Replication factor-A C terminal domain 203 334 IPR013955 -
Adu07g02306 486 PANTHER REPLICATION FACTOR A 1, RFA1 32 279 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu07g02306 486 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 32 279 - -
Adu07g02306 486 SUPERFAMILY Nucleic acid-binding proteins 38 158 IPR012340 -
Adu07g02306 486 Gene3D - 181 343 IPR012340 -
Adu07g02306 486 SUPERFAMILY Nucleic acid-binding proteins 184 335 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02306 Adu-Chr7 75980169 75982574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02306 29 331 Core DNA Replication Machinery Family AT5G08020 22.769 3.69e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02306 - - adu:107458794 823.542