Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02296 ATGAGTAGTTTACAATGGAAGAAACTGAAGGTCTTGGGAGCGGGTTCTTATGGTATTGTTTATCTTGCAATTGTTATTGATATACAAACACCGTATCAGAGCTTCATTGCTATGAAGAGCTCCATTCCCAGATTGGCATTCTCATTGAAGAAAGAAGAACAGATTTTCAAATCATTGTGCGAAGGTGAAAGCAGTGGTTGCCAAGAAATCATTCGAGGCTTTCGAACTGAGATCATGGTAGAGAACGAGCAGTACTTTATCAATCTTCTATTGAAGTATGCACGCATGATTGTTAAAGGGCTTTCGCATATTCATGGCAAAGGAATCGTCCACTGTCACCTCAAGTCAGAGAACATTCTTCTGTTTCCTTTACTGGACAAAGAGAGTGTAAACTGTCAATTGAAGATTGTGGATTTCGAATTATCTAAGACCAAAAAGGAGAAAGCAGATGTTGAGGTTTGGAAGTCCAAGTCTAGAGGTATGCAGTCGTACTTGTCGCCGGAGCATTTTTCGGGCATAATGATGCTCCGAGGGATATATGAGCACTTAGTTGCATAG 558 0.405 MSSLQWKKLKVLGAGSYGIVYLAIVIDIQTPYQSFIAMKSSIPRLAFSLKKEEQIFKSLCEGESSGCQEIIRGFRTEIMVENEQYFINLLLKYARMIVKGLSHIHGKGIVHCHLKSENILLFPLLDKESVNCQLKIVDFELSKTKKEKADVEVWKSKSRGMQSYLSPEHFSGIMMLRGIYEHLVA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02296 185 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 94 - -
Adu07g02296 185 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 92 170 - -
Adu07g02296 185 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Adu07g02296 185 SUPERFAMILY Protein kinase-like (PK-like) 6 173 IPR011009 -
Adu07g02296 185 SMART serkin_6 6 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02296 185 Gene3D Transferase(Phosphotransferase) domain 1 1 176 - -
Adu07g02296 185 Pfam Protein kinase domain 88 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02296 185 ProSiteProfiles Protein kinase domain profile. 6 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02296 185 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 92 170 - -
Adu07g02296 185 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02296 Adu-Chr7 75748311 75748868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02296 4 168 MAP Kinase Kinase Kinase AT4G36950 31.414 9.10e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu07g02296 Pkinase 5.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02296 - - adu:110273625 368.622