Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02275 ATGGAGAAATTAACGGATAAAGAAGCTGAAGCAGGGCTAGAGCTTACCAACACCGAAGACTCAGCGGCTGTTTTcggcgatagatgcggacggcagaagcagctagaagctttagcggtgATAACTGTGTGTGTGTGTGTGTTTAGGATAGGGGTGGCGGCTGCTGCTGCTACTATCGTCAATATACCAACACAGATAGTGCCTCATGCCTATGACTCAGCCTTTGCCTCTCTTCAATTCCAATATCCATGGCCTTTAGCCTTTGAAGGGTTTCCAGAAGATAGAGCTGCAAGTGCTTCTAAGAGCCATAGCCAAGCAGAGAAAAGAAGAAGGGACAGGATCAATGCACAGCTTGCAACTCTTAGAAAACTGATTCCTAAGTCTGATAAGATGGACAAGGCTGCATTACTAGGGAATGTAGTATATCATGTGAAGGATCTAAAGCGAAAAGCGATGGATGTGAGCAAAAGCATCACAGTTCCAAGTGAAATTGATGAAGTAACAATAATAGAGTGTGACCCTGATCAAGATGAAAGCTATGCTAAAGTGAAGATACTGAAGCACAACATTGTAATTTCAGTTTGTTGTGATGATAGACCTGAACTTTTCAGTGAACTCATTCAAGTCCTAAAAGGGTTGAGGCTCATAAATCAAGATCATAACATATTCAGAAGCAGCAAACAGCTAACAGAAGTAGCAAAACAGAAGCAGCAAAACATACTCAAAATAAAAAACATCAGAAAATCAGAATCCAAAATCAAGAAGGCAGCATAG 774 0.3824 MEKLTDKEAEAGLELTNTEDSAAVFGDRCGRQKQLEALAVITVCVCVFRIGVAAAAATIVNIPTQIVPHAYDSAFASLQFQYPWPLAFEGFPEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGNVVYHVKDLKRKAMDVSKSITVPSEIDEVTIIECDPDQDESYAKVKILKHNIVISVCCDDRPELFSELIQVLKGLRLINQDHNIFRSSKQLTEVAKQKQQNILKIKNIRKSESKIKKAA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02275 257 CDD bHLH_AtAIG1_like 93 170 - -
Adu07g02275 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 99 151 IPR036638 GO:0046983
Adu07g02275 257 Pfam Helix-loop-helix DNA-binding domain 101 147 IPR011598 GO:0046983
Adu07g02275 257 Gene3D - 93 156 IPR036638 GO:0046983
Adu07g02275 257 PANTHER TRANSCRIPTION FACTOR BHLH51 81 216 - -
Adu07g02275 257 PANTHER TRANSCRIPTION FACTOR BHLH30 81 216 IPR045847 GO:0003700|GO:0006355
Adu07g02275 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 147 IPR011598 GO:0046983
Adu07g02275 257 SMART finulus 104 153 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02275 Adu-Chr7 75197712 75199771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02275 87 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 46.043 1.15e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu07g02275 HLH 1.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02275 - - adu:107459448 376.326