Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02272 ATGAAGATTCAGTGCAACGTGTGTGAGGCTGCTGAGGCTAAAGTTCTTTGCTGTGCTGATGAGGCTGCGCTTTGTTGGGAGTGTGATGAGAAGGTTCATGCTGCTAACAAGCTCGCTAGCAAGCACCAGAGGGTTCCACTTTCCATGTCTTCTTCTCACATGCCCAAATGTGATATTTGTCAGGAAGCATTTGGCTATTTCTTCTGTCTAGAGGATCGAGCTTTACTGTGTCGAAAGTGTGATGTGGCAATACACACGGCGAATACTTATGTCTCCGGTCATCAGAGGTTTCTTCTCACTGGTGTAAGAGTAGGTCTAGAAGCAACCGAGCCCGGTGGTACTTCTTCAACTTCTTTGAAGTCGGATTCTGGGGAGAAAGCTTCCGACACTAAGTCCTCTTCTGTCTCCAGAAAGGTGTCGACGATGCCCCAGTCGTCGGATTACAATGAAATGTTACCCCTTGATGCTGGGGGAGTTGGCGAGATGCCTCCGGCTAAGGAGTCTTATGGTGGTGGTTCTACTGCCGGAAATATCTCACCGTGGCCGATCGAAGAATTCCTTGGCCTAAATGATTTCGGTCAAGGTTATAATTACATGGAAGGATCATCAAAGGCTGATAGTGGTAAGCTTGGGGATTCTGATTCTCCGGTCTTAAGATCCGTCGAAGAGGAAATGGGAATGGAGGACGATGATGAGTACCTGAGCCGCGTTCCGGATTCATCGTCATATGCTGTTCTCCCATGCAAGAGACTCGGTATTCGAGGCGGCGGAGGCACCACCTTTGAGTTGGTTTCTTCTCTGGTCCCTACCCTCATAACTTAG 822 0.4878 MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSMSSSHMPKCDICQEAFGYFFCLEDRALLCRKCDVAIHTANTYVSGHQRFLLTGVRVGLEATEPGGTSSTSLKSDSGEKASDTKSSSVSRKVSTMPQSSDYNEMLPLDAGGVGEMPPAKESYGGGSTAGNISPWPIEEFLGLNDFGQGYNYMEGSSKADSGKLGDSDSPVLRSVEEEMGMEDDDEYLSRVPDSSSYAVLPCKRLGIRGGGGTTFELVSSLVPTLIT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02272 273 MobiDBLite consensus disorder prediction 109 176 - -
Adu07g02272 273 MobiDBLite consensus disorder prediction 110 148 - -
Adu07g02272 273 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 245 - -
Adu07g02272 273 SMART bboxneu5 52 99 IPR000315 GO:0008270
Adu07g02272 273 SMART bboxneu5 4 47 IPR000315 GO:0008270
Adu07g02272 273 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Adu07g02272 273 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Adu07g02272 273 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
Adu07g02272 273 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 245 - -
Adu07g02272 273 Gene3D Classic Zinc Finger 1 92 - -
Adu07g02272 273 CDD Bbox1_BBX-like 5 47 - -
Adu07g02272 273 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02272 Adu-Chr7 75101922 75104676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02272 1 218 C2C2-CO-like Transcription Factor Family AT1G78600 55.365 8.15e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Adu07g02272 zf-B_box 6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02272 - - gmx:100790959 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02272 07 75101922 75104676 Adu07g02272 07 75101922 75104676 ECH