Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02232 ATGAAACTGGTGAGTTACATGTCACAATGGAGAGGCATTGCAAAGGAAGCTATGGACCGAACAGCCATAGCAGTAAAGTTCCTCTGTTGCCTTCACATTACGGACACCTACTTCTGTTCCCCAACTCACGTGTATGGGCCTAGTATGCTCCCCACACTCAACATGGTAGGCGACATCGTTTTGGTTGAACACGTGTCTCAGAGGCTTGGGAAGGTTCGGCATGGTGACTTGGTTGTGATTCGGTCACCGTTGGACCCTAAGAGGTGCCTTACCAAAAGGATTATGGGAATGGAAGGGGATACTGTTACTTACTTTGATCCTATGCTTGGTGATGCTACTCGTGTTGCTGTGGTGCCAAAGGGGCATGTTTGGATTCAAGGGGATAACATCTTTGCATCCCATGATTCACGGCATTTCGGCCCTGTTCCTTATGGCCTTATACAAGGAAAAGTGTTTTTCAGGGTTTGGCCACTTGATTGCCTTGGAGTACCGGCACAGCAAAGCAATTATCTTATTCAGTTTCTTAAAATTTACTTTATTATATCCTCTCCTCCATTGTCTGAATATGAGAAGGTTGACTTTGCAAATTCCATCCATCCTCCATTTCTCTTCCTTATCACGGCCTATAGTACGAGGTTAATAGATGATGCTTTTCATTTGCTTACCGGGAAGAACTTATGGTCATTCATCCGGTACAATGCAATATACTTGGATGAAGCCTCAGTGGTTGCCATGAAGGTGGCATTTAGCAAGAATCAAACAAATCTGGAAATTGATATCAACATATCTCAGCTTGCCCTCAAGTTGGTGGATGGATATCTATCATTCCTAGCTTGTGTGCAAGTTCTTGAAACTGCTTGGCCTCCACCGGTTGGATAG 879 0.4448 MKLVSYMSQWRGIAKEAMDRTAIAVKFLCCLHITDTYFCSPTHVYGPSMLPTLNMVGDIVLVEHVSQRLGKVRHGDLVVIRSPLDPKRCLTKRIMGMEGDTVTYFDPMLGDATRVAVVPKGHVWIQGDNIFASHDSRHFGPVPYGLIQGKVFFRVWPLDCLGVPAQQSNYLIQFLKIYFIISSPPLSEYEKVDFANSIHPPFLFLITAYSTRLIDDAFHLLTGKNLWSFIRYNAIYLDEASVVAMKVAFSKNQTNLEIDINISQLALKLVDGYLSFLACVQVLETAWPPPVG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02232 292 CDD S26_SPase_I 40 151 IPR019533 GO:0004252|GO:0006465
Adu07g02232 292 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 7 163 - -
Adu07g02232 292 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu07g02232 292 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu07g02232 292 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu07g02232 292 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 7 163 - -
Adu07g02232 292 Pfam Signal peptidase, peptidase S26 24 106 IPR019533 GO:0004252|GO:0006465
Adu07g02232 292 Pfam Signal peptidase, peptidase S26 113 156 IPR019533 GO:0004252|GO:0006465
Adu07g02232 292 TIGRFAM sigpep_I_bact: signal peptidase I 25 105 IPR000223 GO:0006508|GO:0008236|GO:0016020
Adu07g02232 292 SUPERFAMILY LexA/Signal peptidase 36 163 IPR036286 -
Adu07g02232 292 Gene3D Umud Fragment, subunit A 34 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02232 Adu-Chr7 73987924 73991557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02232 49 162 MADS-box Gene Family AT1G29960 49.565 6.21e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02232 K09647 - zju:107414309 239.965