Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02176 ATGATCCAAAATTTTCAGGCAGCTGATGTATTCCTGCTAGCATTCTCTCTCATAAGCAGGGCTAGCTATGAAAATGTTGCCAAGAAATGGATTCCTGAGTTGAGACATTATGCTCCTGGTGTTCCAATTATTCTTGTTGGAACAAAACTTGCGCCTATCACCACAGTGCAGGGTGAGGAACTGAGAAAACTTATCGGTGCTCCAGTTTACATCGAATGTAGTTCAAAAACACAGCAGAATGTGAAGGCTGTTTTTGATGCGGCCATCAAAGTAGTTCTCCAGCCTCCAAAGCAGAACAAAAAGAAGAGAAAGGTCTTTTCCATTCTATATCTTTGCTGCATAACACATGATGGTGTTGGTGTTTCGAAAACATTACTGAACCAAATGTTCGGACGAGAGGGACAAGAATCCGAGGAGGGTATTAGTCTGCTCATCAGCAGAAAGTTGCTGAAGCTGATGAATGGAGACGTGCGGTATCTGAGGGATGCTGGCAAATCATCTTTCATCTTAACAGTTGAACTAGCTGCTTCCCAGAAATTGATTGCTTAA 549 0.4244 MIQNFQAADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPIILVGTKLAPITTVQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKQNKKKRKVFSILYLCCITHDGVGVSKTLLNQMFGREGQESEEGISLLISRKLLKLMNGDVRYLRDAGKSSFILTVELAASQKLIA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02176 182 Gene3D - 1 98 IPR027417 -
Adu07g02176 182 ProSiteProfiles small GTPase Ras family profile. 1 109 IPR001806 GO:0003924|GO:0005525
Adu07g02176 182 SMART rab_sub_5 3 95 - -
Adu07g02176 182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 98 IPR027417 -
Adu07g02176 182 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 88 174 IPR003594 -
Adu07g02176 182 PRINTS Transforming protein P21 ras signature 39 52 - -
Adu07g02176 182 PRINTS Transforming protein P21 ras signature 70 92 - -
Adu07g02176 182 SMART rho_sub_3 1 95 IPR001806 GO:0003924|GO:0005525
Adu07g02176 182 ProSiteProfiles small GTPase Rho family profile. 1 92 - -
Adu07g02176 182 ProSiteProfiles small GTPase Rab1 family profile. 1 142 - -
Adu07g02176 182 PANTHER RHO FAMILY GTPASE 4 105 IPR003578 GO:0005525|GO:0007264
Adu07g02176 182 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 4 105 - -
Adu07g02176 182 Pfam Ras family 5 93 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02176 Adu-Chr7 72139175 72140937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02176 114 179 Histidine Kinase Gene Family AT1G09570 68.182 5.91e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02176 K04392 - gmx:100785464 179.104