Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02158 ATGACCTGTTTTCCTTTCTTCAGTAAGATCTCATCTTCAGCAAAACAAGAATCACATCCAGAAACTGATGAAGATTTATCTGGTCTTCAACATGTTAGACTTTACACATACAAAGAACTAAGAAATGCTACTAAGGATTTTAGTCCAGCCAATAAAATTGGAGAGGGTGGTTTTGGTTCTGTGTATAAGGGACAACTTAAAGATGGAAAACTTACTGCTATAAAAGTTCTTTCGGCGGAATCCAGACAAGGGGTGAAGGAATTCTTGACAGAGATTAATGTGATCTCAGAAGTTGAGCATGAAAATTTGGTGAAGTTATATGGTTGTTGTGTGGAAAGAAATAATAGAATATTAGTCTACAATTATCTCGAGAAAAATAGTCTCGCGCAAAGTCTTCTAGGTTCAGGTGATCACACTGGCCTTCTCTTCAattggcaaactcgatgtaaaataagcattggggtcgcgcgtgggctagcatttcttcatgaggaagtaaggcctcatattattcatagagatataaaagcaagtaatattctacttgaccgggatcttactcccaagatttcagatttcggtcttgcaaaGCTTATTCCAGCAAACATGACTCATGTCAGCACGCGTGTAGCAGGAACACTAGGTTATTTGGCACCGGAGTATGCAATAGGCGGGAAGCTGACACGAAAAGCGGACATTTACAGTTTCGGTGTCCTCCTTGTGGAGATAGTGAGTGGAACGTGTAACACAAATTCAAGATTACCTATGGAAGAACAATTTCTCCTAGAAAGGGCATGGAATCTGTACGAGCGAAACGAATTGGTCGCACTCGTAGACATATCACTAAACGGAAAATTTGACGCCGAGCAGGCCTGTAGGTTCCTCAAGATTGGCCTTCTTTGCACTCAAGACTCCCCAAGGATCCGGCCTTCGATGTCTTCGGTAGTCAAGATGCTTACCGGAGAAATGACTGTCGACGACAGCAAGATAACAAAACCAGCCTTAATTACTGACATCATGGACCTTAAAGTTAGAAAGAAACAGGAAATTAATAACTCTAATATGAAGACAACATCTACATACAACACAAACACATCTTCACAGGGTAGTGCTACTAGCACCTTGTCATCACCTCCTTCTACTGCTGTAATTACTTCAACCTTCACTGCAAGATAA 1176 0.3537 MTCFPFFSKISSSAKQESHPETDEDLSGLQHVRLYTYKELRNATKDFSPANKIGEGGFGSVYKGQLKDGKLTAIKVLSAESRQGVKEFLTEINVISEVEHENLVKLYGCCVERNNRILVYNYLEKNSLAQSLLGSGDHTGLLFNWQTRCKISIGVARGLAFLHEEVRPHIIHRDIKASNILLDRDLTPKISDFGLAKLIPANMTHVSTRVAGTLGYLAPEYAIGGKLTRKADIYSFGVLLVEIVSGTCNTNSRLPMEEQFLLERAWNLYERNELVALVDISLNGKFDAEQACRFLKIGLLCTQDSPRIRPSMSSVVKMLTGEMTVDDSKITKPALITDIMDLKVRKKQEINNSNMKTTSTYNTNTSSQGSATSTLSSPPSTAVITSTFTAR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02158 391 MobiDBLite consensus disorder prediction 350 391 - -
Adu07g02158 391 MobiDBLite consensus disorder prediction 351 391 - -
Adu07g02158 391 Pfam Protein kinase domain 50 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02158 391 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Adu07g02158 391 CDD STKc_IRAK 53 321 - -
Adu07g02158 391 SMART serkin_6 47 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02158 391 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Adu07g02158 391 PANTHER - 2 376 - -
Adu07g02158 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Adu07g02158 391 Gene3D Transferase(Phosphotransferase) domain 1 123 335 - -
Adu07g02158 391 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 376 - -
Adu07g02158 391 ProSiteProfiles Protein kinase domain profile. 47 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g02158 391 SUPERFAMILY Protein kinase-like (PK-like) 24 319 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02158 Adu-Chr7 71265566 71269139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02158 15 384 Receptor kinase-like Gene Family AT1G07650 47.709 7.85e-110 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu07g02158 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02158 - - gmx:100816707 582.793