Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02154 ATGAGCAACATAAGCTTGGTAGAGGCAAGGCTTCCACCAGGGTTCAGATTTCATCCAAAAGATGAAGAGCTTGTGTGTGATTACTTGATGAAGAAGTTCACGCACAATGAATCCCTTCTCATGATTGATGTCGACCTCAACAAGTGTGAGCCATGGGATATTCCTGAAACAGCATGTGTGGGAGGGAAGGAGTGGTACTTCTACACACAGAGAGACAGAAAGTATGCAACGGGTCTGCGTACAAACAGAGCAACGGCATCAGGATATTGGAAGGCCACTGGCAAGGACAGGCCTATCCTTAGGAAGGGCAGCCTTGTTGGTATGCGAAAGACTCTTGTCTTCTATCAAGGTCGGGCTCCCAAAGGCCGTAAGACTGAGTGGGTCATGCATGAGTTTCGCGTTGAACCTCCTCTTCCTCCCCCCAACACTACTTCTTCTAAGGAAGATTGGGTGTTGTGTAGGGTATTCTACAAGAACAGAGAAGTTGGTGGCAAACCTAATAGCATGGGAAGCTGTTATGATGACACGGGCTCTTCATCTCTTCCAGCATTAATGGATTCTTACATCAGCTTTGACCAACAACAACAACCTCAAACCCATCTTCATGCTGATGAGTATGAGCAAGTGCCCTGCTTCTCCATTTTCTCTCACACCCAAACAAGCCCTATTTTCAACCACATAATGGAGCCTAAGTTATTCCCTACCAACAACAACAACAATAATGCAACTTTATATGGTGGAGGAGGAACTACTACAACACCCAATTTGGGTTCTTGCTTAGACCCTTTTTCATGTGATAGGAAAGTATTGAAAGCTGTTTTGAGTCAGCTCACAAATATGGAAAGAAACATACCTAATAATAATAACAACAATACAAATAGTATAAAAGGGTCACCAAGTTTAGGAGAAGGTAGTTCTGAGAGTTACTTATCTGAGGACAACGAGATTCGCAGGTACGCTTTGTCGGTATCACTGAGGTTTTTACACCGTCCAATAATACCGGGGGAGCCGAATGGGTTTGTGGAGCCTAGCTATGAGTTTTCATCCAATTTTGACCGAGTCCATGTGTCTCAGGATGCTGATGATGGAATGAGCGGCGAAACCGTGCCGGTAGAGGAAGCAGAAGCGATAGATTCGTCCGCCGCAGATGCGGACCTAGATGCAGAAGCAGCAGTGAGGATTGTTGACGGGATAGGTCGCATCAAGGGATTCTCGATCAGGAGGTCCAAGGTGGGTCGCAGAACAAAACAGGGGGCAGAGGGCGAAATCATTTGGCAGATATTTGTGTGCTCGAGGGAAGGAGAGCGAGATGGGAAACACATGCAGCGGGAAGACAGGAAGATGGATTCTCGACCGATCACACGGTGCGGGTGTGAAGCACGGATTAAGGTCCACGTTGATGATGCCAGCGGGCAATGGGTTGTTGAACAATTCTGCGATAACCATAATCATCCCATGCTGGATGCGAGGTTCAAGGGTCTGTCGCGGTCACACAGAGCAGTCAAGAAAGGCAATTTGCACCAAATTAATCAGTCAGGAGGATTCGAGACTGTTGGGTTCGAGATAAAGGACATATATAATGAGATAGAGAAGCAAAGGCGGGCTGGCGCGACAGATGCTGAGGCCGCGTTGAAGTTCTTGGGAACTTTAAGGACCACTGATTCTGGGAtgttctggaagtactcactggatgttgacaagaggttggaaaatctcttctggtgcgatgAGGTTGACAAATTTGAGAGAATATGGACGGATAATGTGGCATACCATATGTTGGAGGATCATCCCTGGATAGTGAACATGTATGCAAAGAAGCATTCATGGTCTAATGCCTATATCCGGGGAAAATTCTTCGCGGGATTGAAGACGACATCGAGGTGCGAGGCTTTGAATATGCAGCTTGGAAAATTTATACACAACGGGTACAATCTGAGGGAGTTTGTGGAGCACTTCCAACACTCTTTGGAATTCATGAGGAGGAGAGAACTAGTGGCAGACTACAAGTCTGCGTATGGCAAGCCTATTGTAAAGACGAAACTCGAGGCCATTGAGCAGTTCGCTGTGACGGTTTATACAAGAGAGGTTTTTGAACTGTTTCGGGAGGTGCTGATGCTAGCcagcaatgttagagttgtgtcctga 2148 0.4479 MSNISLVEARLPPGFRFHPKDEELVCDYLMKKFTHNESLLMIDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGSLVGMRKTLVFYQGRAPKGRKTEWVMHEFRVEPPLPPPNTTSSKEDWVLCRVFYKNREVGGKPNSMGSCYDDTGSSSLPALMDSYISFDQQQQPQTHLHADEYEQVPCFSIFSHTQTSPIFNHIMEPKLFPTNNNNNNATLYGGGGTTTTPNLGSCLDPFSCDRKVLKAVLSQLTNMERNIPNNNNNNTNSIKGSPSLGEGSSESYLSEDNEIRRYALSVSLRFLHRPIIPGEPNGFVEPSYEFSSNFDRVHVSQDADDGMSGETVPVEEAEAIDSSAADADLDAEAAVRIVDGIGRIKGFSIRRSKVGRRTKQGAEGEIIWQIFVCSREGERDGKHMQREDRKMDSRPITRCGCEARIKVHVDDASGQWVVEQFCDNHNHPMLDARFKGLSRSHRAVKKGNLHQINQSGGFETVGFEIKDIYNEIEKQRRAGATDAEAALKFLGTLRTTDSGMFWKYSLDVDKRLENLFWCDEVDKFERIWTDNVAYHMLEDHPWIVNMYAKKHSWSNAYIRGKFFAGLKTTSRCEALNMQLGKFIHNGYNLREFVEHFQHSLEFMRRRELVADYKSAYGKPIVKTKLEAIEQFAVTVYTREVFELFREVLMLASNVRVVS 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02154 715 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 230 - -
Adu07g02154 715 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
Adu07g02154 715 MobiDBLite consensus disorder prediction 281 309 - -
Adu07g02154 715 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Adu07g02154 715 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN 3 230 - -
Adu07g02154 715 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Adu07g02154 715 Pfam FAR1 DNA-binding domain 402 487 IPR004330 -
Adu07g02154 715 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02154 Adu-Chr7 71207870 71217206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02154 2 312 NAC Transcription Factor Family AT1G56010 59.443 1.54e-117 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu07g02154 NAM 2.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02154 - - ahf:112703413 589.341